RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 BTBD11A6QL63 1104 aa27.64■■■□□ 2.02
EPHB3-202ENST00000473079 TM4SF1P30408 202 aa27.64■■■□□ 2.02
EPHB3-202ENST00000473079 RALBP1Q15311 655 aa27.64■■■□□ 2.02
EPHB3-202ENST00000473079 FMNL2Q96PY5 1086 aa27.64■■■□□ 2.02
EPHB3-202ENST00000473079 COL15A1P39059 1388 aa27.62■■■□□ 2.01
EPHB3-202ENST00000473079 USPL1Q5W0Q7 1092 aa27.62■■■□□ 2.01
EPHB3-202ENST00000473079 PXDNLA1KZ92 1463 aa27.62■■■□□ 2.01
EPHB3-202ENST00000473079 EIF5P55010 431 aaKnown RBP27.61■■■□□ 2.01
EPHB3-202ENST00000473079 DDR1Q08345 913 aa27.61■■■□□ 2.01
EPHB3-202ENST00000473079 CANXP27824 592 aaKnown RBP27.6■■■□□ 2.01
EPHB3-202ENST00000473079 MCM10Q7L590 875 aa27.6■■■□□ 2.01
EPHB3-202ENST00000473079 NEFMP07197 916 aa27.59■■■□□ 2.01
EPHB3-202ENST00000473079 DDX10Q13206 875 aaKnown RBP27.59■■■□□ 2.01
EPHB3-202ENST00000473079 PLEKHF1Q96S99 279 aa27.59■■■□□ 2.01
EPHB3-202ENST00000473079 A0A087WZG4 1122 aa27.58■■■□□ 2.01
EPHB3-202ENST00000473079 A0A0G2JLW4 131 aa27.58■■■□□ 2.01
EPHB3-202ENST00000473079 POLRMTO00411 1230 aaKnown RBP27.58■■■□□ 2.01
EPHB3-202ENST00000473079 KCNQ3O43525 872 aa27.58■■■□□ 2.01
EPHB3-202ENST00000473079 PNNQ9H307 717 aaKnown RBP27.58■■■□□ 2.01
EPHB3-202ENST00000473079 KIAA1551Q9HCM1 1747 aa27.58■■■□□ 2.01
EPHB3-202ENST00000473079 BCL2L12Q9HB09 334 aa27.57■■■□□ 2
EPHB3-202ENST00000473079 IL6STP40189 918 aaPredicted RBP27.56■■■□□ 2
EPHB3-202ENST00000473079 DCTN1Q14203 1278 aa27.56■■■□□ 2
EPHB3-202ENST00000473079 DPEP1P16444 411 aa27.55■■■□□ 2
EPHB3-202ENST00000473079 TAF7Q15545 349 aaPredicted RBP27.55■■■□□ 2
EPHB3-202ENST00000473079 KCNA3P22001 575 aa27.54■■■□□ 2
EPHB3-202ENST00000473079 NFIXQ14938 502 aa27.54■■■□□ 2
EPHB3-202ENST00000473079 WWC3Q9ULE0 1092 aa27.54■■■□□ 2
EPHB3-202ENST00000473079 A1BGP04217 495 aa27.52■■■□□ 2
EPHB3-202ENST00000473079 SNRPA1P09661 255 aaKnown RBP27.52■■■□□ 2
EPHB3-202ENST00000473079 NFE2L2Q16236 605 aa27.52■■■□□ 2
EPHB3-202ENST00000473079 USP16Q9Y5T5 823 aa27.51■■□□□ 1.99
EPHB3-202ENST00000473079 N4BP2Q86UW6 1770 aaPredicted RBP27.5■■□□□ 1.99
EPHB3-202ENST00000473079 BCS1LQ9Y276 419 aa27.5■■□□□ 1.99
EPHB3-202ENST00000473079 MYBBP1AQ9BQG0 1328 aaKnown RBP27.49■■□□□ 1.99
EPHB3-202ENST00000473079 PIM2Q9P1W9 311 aa27.49■■□□□ 1.99
EPHB3-202ENST00000473079 SERPINB2P05120 415 aa27.48■■□□□ 1.99
EPHB3-202ENST00000473079 PNISRQ8TF01 805 aaKnown RBP27.48■■□□□ 1.99
EPHB3-202ENST00000473079 MAPK8IP3Q9UPT6 1336 aa27.47■■□□□ 1.99
EPHB3-202ENST00000473079 NPM2Q86SE8 214 aaKnown RBP27.47■■□□□ 1.99
EPHB3-202ENST00000473079 ADCY9O60503 1353 aa27.47■■□□□ 1.99
EPHB3-202ENST00000473079 TBC1D2BQ9UPU7 963 aa27.46■■□□□ 1.99
EPHB3-202ENST00000473079 NRXN2Q9P2S2 1712 aa27.45■■□□□ 1.99
EPHB3-202ENST00000473079 PRAMEF22A3QJZ6 481 aa27.45■■□□□ 1.98
EPHB3-202ENST00000473079 MIS18AQ9NYP9 233 aa27.44■■□□□ 1.98
EPHB3-202ENST00000473079 ZNF330Q9Y3S2 320 aaPredicted RBP27.44■■□□□ 1.98
EPHB3-202ENST00000473079 BRCA1P38398 1863 aaKnown RBP27.44■■□□□ 1.98
EPHB3-202ENST00000473079 ATP10DQ9P241 1426 aa27.43■■□□□ 1.98
EPHB3-202ENST00000473079 CAMTA2O94983 1202 aa27.43■■□□□ 1.98
EPHB3-202ENST00000473079 DALRD3Q5D0E6 543 aaKnown RBP27.43■■□□□ 1.98
EPHB3-202ENST00000473079 TBC1D9BQ66K14 1250 aa27.43■■□□□ 1.98
EPHB3-202ENST00000473079 DLG5Q8TDM6 1919 aa27.42■■□□□ 1.98
EPHB3-202ENST00000473079 CHRNA5P30532 468 aa27.42■■□□□ 1.98
EPHB3-202ENST00000473079 ARHGAP27Q6ZUM4 889 aa27.41■■□□□ 1.98
EPHB3-202ENST00000473079 DZIP3Q86Y13 1208 aaKnown RBP27.41■■□□□ 1.98
EPHB3-202ENST00000473079 SCN7AQ01118 1682 aa27.4■■□□□ 1.98
EPHB3-202ENST00000473079 AFDNP55196 1824 aaKnown RBP27.4■■□□□ 1.98
EPHB3-202ENST00000473079 BICDL1Q6ZP65 573 aa27.4■■□□□ 1.98
EPHB3-202ENST00000473079 NBPF26B4DH59 902 aa27.39■■□□□ 1.98
EPHB3-202ENST00000473079 RGL2O15211 777 aa27.39■■□□□ 1.98
EPHB3-202ENST00000473079 GIGYF1O75420 1035 aaPredicted RBP27.39■■□□□ 1.98
EPHB3-202ENST00000473079 C1QTNF8P60827 252 aa27.39■■□□□ 1.98
EPHB3-202ENST00000473079 NBPF10Q6P3W6 841 aaKnown RBP27.39■■□□□ 1.98
EPHB3-202ENST00000473079 CLEC4GQ6UXB4 293 aa27.39■■□□□ 1.98
EPHB3-202ENST00000473079 NBPF15Q8N660 670 aa27.39■■□□□ 1.98
EPHB3-202ENST00000473079 EIF4A1P60842 406 aaKnown RBP27.38■■□□□ 1.97
EPHB3-202ENST00000473079 THUMPD2Q9BTF0 503 aaKnown RBP27.38■■□□□ 1.97
EPHB3-202ENST00000473079 CARMIL3Q8ND23 1372 aa27.37■■□□□ 1.97
EPHB3-202ENST00000473079 PIP4K2AP48426 406 aaPredicted RBP27.37■■□□□ 1.97
EPHB3-202ENST00000473079 RIPK4P57078 832 aa27.37■■□□□ 1.97
EPHB3-202ENST00000473079 SETDB2Q96T68 719 aa27.37■■□□□ 1.97
EPHB3-202ENST00000473079 PRKRIP1Q9H875 184 aaPredicted RBP27.37■■□□□ 1.97
EPHB3-202ENST00000473079 KDM3BQ7LBC6 1761 aa27.36■■□□□ 1.97
EPHB3-202ENST00000473079 TMPOP42166 694 aaKnown RBP27.36■■□□□ 1.97
EPHB3-202ENST00000473079 PDZRN3Q9UPQ7 1066 aa27.36■■□□□ 1.97
EPHB3-202ENST00000473079 ARFGEF1Q9Y6D6 1849 aa27.36■■□□□ 1.97
EPHB3-202ENST00000473079 ZEB1P37275 1124 aaPredicted RBP27.35■■□□□ 1.97
EPHB3-202ENST00000473079 BRIP1Q9BX63 1249 aa27.35■■□□□ 1.97
EPHB3-202ENST00000473079 GPBP1L1Q9HC44 474 aaPredicted RBP27.35■■□□□ 1.97
EPHB3-202ENST00000473079 BABAM1Q9NWV8 329 aa27.35■■□□□ 1.97
EPHB3-202ENST00000473079 H0YIN7 160 aa27.34■■□□□ 1.97
EPHB3-202ENST00000473079 LMOD3Q0VAK6 560 aa27.34■■□□□ 1.97
EPHB3-202ENST00000473079 PRR5LQ6MZQ0 368 aa27.34■■□□□ 1.97
EPHB3-202ENST00000473079 C2CD5Q86YS7 1000 aa27.33■■□□□ 1.97
EPHB3-202ENST00000473079 ZNF652Q9Y2D9 606 aa27.33■■□□□ 1.97
EPHB3-202ENST00000473079 PDE6BP35913 854 aa27.32■■□□□ 1.96
EPHB3-202ENST00000473079 BCORQ6W2J9 1755 aa27.31■■□□□ 1.96
EPHB3-202ENST00000473079 WDR43Q15061 677 aaKnown RBP eCLIP27.31■■□□□ 1.96
EPHB3-202ENST00000473079 TTLL6Q8N841 843 aa27.31■■□□□ 1.96
EPHB3-202ENST00000473079 RUNDC1Q96C34 613 aa27.31■■□□□ 1.96
EPHB3-202ENST00000473079 CNBD1Q8NA66 436 aa27.29■■□□□ 1.96
EPHB3-202ENST00000473079 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
EPHB3-202ENST00000473079 LAMB4A4D0S4 1761 aa27.29■■□□□ 1.96
EPHB3-202ENST00000473079 DLEC1Q9Y238 1755 aa27.28■■□□□ 1.96
EPHB3-202ENST00000473079 TSPYL4Q9UJ04 414 aa27.28■■□□□ 1.96
EPHB3-202ENST00000473079 C9orf131Q5VYM1 1079 aa27.27■■□□□ 1.96
EPHB3-202ENST00000473079 ZNF526Q8TF50 670 aaPredicted RBP27.27■■□□□ 1.96
EPHB3-202ENST00000473079 ERBB4Q15303 1308 aa27.26■■□□□ 1.95
EPHB3-202ENST00000473079 ST5P78524 1137 aa27.26■■□□□ 1.95
EPHB3-202ENST00000473079 CCDC146Q8IYE0 955 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms