RNA–Protein interactions for RNA: ENST00000472827.1

LMBRD1-203, Transcript of LMBR1 domain containing 1, humanhuman

TSL 5

Gene LMBRD1, Length 1,861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1-203ENST00000472827 SBF1O95248 1867 aa13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 DDR1Q08345 913 aa13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 CC2D1BQ5T0F9 858 aaKnown RBP13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 NFATC2IPQ8NCF5 419 aa13.19□□□□□ -0.3
LMBRD1-203ENST00000472827 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
LMBRD1-203ENST00000472827 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
LMBRD1-203ENST00000472827 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
LMBRD1-203ENST00000472827 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
LMBRD1-203ENST00000472827 CAPN15O75808 1086 aa13.17□□□□□ -0.3
LMBRD1-203ENST00000472827 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
LMBRD1-203ENST00000472827 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
LMBRD1-203ENST00000472827 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
LMBRD1-203ENST00000472827 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
LMBRD1-203ENST00000472827 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 ZPR1O75312 459 aa13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 TJP1Q07157 1748 aa13.15□□□□□ -0.3
LMBRD1-203ENST00000472827 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 HMOX1P09601 288 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 NEFMP07197 916 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 TM4SF1P30408 202 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 RASSF7Q02833 373 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 TEFQ10587 303 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 TNS4Q8IZW8 715 aa13.14□□□□□ -0.31
LMBRD1-203ENST00000472827 STARD3NLO95772 234 aa13.13□□□□□ -0.31
LMBRD1-203ENST00000472827 A0A087WZG4 1122 aa13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
LMBRD1-203ENST00000472827 MRC1P22897 1456 aa13.11□□□□□ -0.31
LMBRD1-203ENST00000472827 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
LMBRD1-203ENST00000472827 LMNB1P20700 586 aa13.11□□□□□ -0.31
LMBRD1-203ENST00000472827 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 NFIXQ14938 502 aa13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
LMBRD1-203ENST00000472827 SERPINB2P05120 415 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 PCNTO95613 3336 aa13.09□□□□□ -0.31
LMBRD1-203ENST00000472827 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 PRELPP51888 382 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 COL15A1P39059 1388 aa13.08□□□□□ -0.32
LMBRD1-203ENST00000472827 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 H0YIN7 160 aa13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 NRXN2Q9P2S2 1712 aa13.07□□□□□ -0.32
LMBRD1-203ENST00000472827 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 POTEHQ6S545 545 aa13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
LMBRD1-203ENST00000472827 NFKBIEO00221 500 aa13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 ZNF622Q969S3 477 aaKnown RBP eCLIP13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
LMBRD1-203ENST00000472827 CARMIL3Q8ND23 1372 aa13.04□□□□□ -0.32
LMBRD1-203ENST00000472827 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
LMBRD1-203ENST00000472827 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
LMBRD1-203ENST00000472827 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
LMBRD1-203ENST00000472827 POTECB2RU33 542 aa13.03□□□□□ -0.32
LMBRD1-203ENST00000472827 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
LMBRD1-203ENST00000472827 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
LMBRD1-203ENST00000472827 NPHP1O15259 732 aa13.02□□□□□ -0.32
LMBRD1-203ENST00000472827 C21orf2O43822 256 aa13.02□□□□□ -0.32
LMBRD1-203ENST00000472827 ERFEQ4G0M1 354 aa13.02□□□□□ -0.32
LMBRD1-203ENST00000472827 PNISRQ8TF01 805 aaKnown RBP13.02□□□□□ -0.32
LMBRD1-203ENST00000472827 DICER1Q9UPY3 1922 aaKnown RBP13.02□□□□□ -0.33
LMBRD1-203ENST00000472827 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
LMBRD1-203ENST00000472827 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
LMBRD1-203ENST00000472827 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms