RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 HMOX1P09601 288 aa9.67□□□□□ -0.86
CCDC171-205ENST00000472806 RGS3P49796 1198 aa9.67□□□□□ -0.86
CCDC171-205ENST00000472806 NGDNQ8NEJ9 315 aaKnown RBP9.67□□□□□ -0.86
CCDC171-205ENST00000472806 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
CCDC171-205ENST00000472806 IRX2Q9BZI1 471 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-205ENST00000472806 HPS5Q9UPZ3 1129 aa9.67□□□□□ -0.86
CCDC171-205ENST00000472806 SSH2Q76I76 1423 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 IGHDP01880 384 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-205ENST00000472806 RRS1Q15050 365 aaKnown RBP9.66□□□□□ -0.86
CCDC171-205ENST00000472806 ANKLE2Q86XL3 938 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 ITPRIPQ8IWB1 547 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
CCDC171-205ENST00000472806 UPF2Q9HAU5 1272 aaKnown RBP9.66□□□□□ -0.86
CCDC171-205ENST00000472806 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
CCDC171-205ENST00000472806 LAS1LQ9Y4W2 734 aaKnown RBP9.66□□□□□ -0.86
CCDC171-205ENST00000472806 FLT4P35916 1363 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 ZNF142P52746 1687 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-205ENST00000472806 GRXCR2A6NFK2 248 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 RGS20O76081 388 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 ZNF853P0CG23 659 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 RLBP1P12271 317 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 TRIM27P14373 513 aa9.65□□□□□ -0.86
CCDC171-205ENST00000472806 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.86
CCDC171-205ENST00000472806 API5Q9BZZ5 524 aaKnown RBP9.65□□□□□ -0.86
CCDC171-205ENST00000472806 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-205ENST00000472806 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
CCDC171-205ENST00000472806 PHACTR3Q96KR7 559 aa9.64□□□□□ -0.87
CCDC171-205ENST00000472806 CDHR5Q9HBB8 845 aa9.64□□□□□ -0.87
CCDC171-205ENST00000472806 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
CCDC171-205ENST00000472806 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 FMN2Q9NZ56 1722 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 EIF5BO60841 1220 aaKnown RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 VAMP4O75379 141 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 TWISTNBQ3B726 338 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 RTL5Q5HYW3 569 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 LRCH3Q96II8 777 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
CCDC171-205ENST00000472806 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
CCDC171-205ENST00000472806 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
CCDC171-205ENST00000472806 FBLN1P23142 703 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 AMPHP49418 695 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 E2F4Q16254 413 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 GAS2L2Q8NHY3 880 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 RTF1Q92541 710 aaKnown RBP9.62□□□□□ -0.87
CCDC171-205ENST00000472806 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
CCDC171-205ENST00000472806 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 KCNA6P17658 529 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 KCNC4Q03721 635 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 ZBTB40Q9NUA8 1239 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 USP35Q9P2H5 1018 aa9.61□□□□□ -0.87
CCDC171-205ENST00000472806 DLG5Q8TDM6 1919 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 SOS1Q07889 1333 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-205ENST00000472806 MAP3K19Q56UN5 1328 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 OSBPP22059 807 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 PRSS12P56730 875 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 BECN1Q14457 450 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 GCC1Q96CN9 775 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
CCDC171-205ENST00000472806 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 KDRP35968 1356 aa9.6□□□□□ -0.87
CCDC171-205ENST00000472806 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 ABCC4O15439 1325 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
CCDC171-205ENST00000472806 ADAMTSL3P82987 1691 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 SPDYE16A6NNV3 312 aaPredicted RBP9.59□□□□□ -0.87
CCDC171-205ENST00000472806 SKAP1Q86WV1 359 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 CHMP4AQ9BY43 222 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
CCDC171-205ENST00000472806 PTPRCP08575 1304 aa9.58□□□□□ -0.88
CCDC171-205ENST00000472806 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
CCDC171-205ENST00000472806 PIK3C2AO00443 1686 aa9.58□□□□□ -0.88
CCDC171-205ENST00000472806 CHL1O00533 1208 aa9.58□□□□□ -0.88
CCDC171-205ENST00000472806 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
CCDC171-205ENST00000472806 THUMPD2Q9BTF0 503 aaKnown RBP9.58□□□□□ -0.88
CCDC171-205ENST00000472806 SETD1BQ9UPS6 1966 aaKnown RBP9.57□□□□□ -0.88
CCDC171-205ENST00000472806 ADGRL3Q9HAR2 1447 aa9.57□□□□□ -0.88
CCDC171-205ENST00000472806 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
CCDC171-205ENST00000472806 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
CCDC171-205ENST00000472806 KCNH5Q8NCM2 988 aa9.57□□□□□ -0.88
CCDC171-205ENST00000472806 TATDN2Q93075 761 aa9.57□□□□□ -0.88
CCDC171-205ENST00000472806 NPHP4O75161 1426 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-205ENST00000472806 RGPD8O14715 1765 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-205ENST00000472806 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-205ENST00000472806 PPP4CP60510 307 aa9.56□□□□□ -0.88
CCDC171-205ENST00000472806 TJAP1Q5JTD0 557 aa9.56□□□□□ -0.88
CCDC171-205ENST00000472806 TSPYL6Q8N831 410 aa9.56□□□□□ -0.88
CCDC171-205ENST00000472806 ABTB2Q8N961 1025 aa9.56□□□□□ -0.88
CCDC171-205ENST00000472806 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms