RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
SMURF1-203ENST00000472627 AIDAQ96BJ3 306 aa19.14■□□□□ 0.65
SMURF1-203ENST00000472627 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
SMURF1-203ENST00000472627 NFIXQ14938 502 aa19.13■□□□□ 0.65
SMURF1-203ENST00000472627 NARFQ9UHQ1 456 aa19.13■□□□□ 0.65
SMURF1-203ENST00000472627 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
SMURF1-203ENST00000472627 TJP1Q07157 1748 aa19.13■□□□□ 0.65
SMURF1-203ENST00000472627 SERPINB2P05120 415 aa19.12■□□□□ 0.65
SMURF1-203ENST00000472627 CHADLQ6NUI6 762 aa19.12■□□□□ 0.65
SMURF1-203ENST00000472627 COL15A1P39059 1388 aa19.11■□□□□ 0.65
SMURF1-203ENST00000472627 ERFEQ4G0M1 354 aa19.11■□□□□ 0.65
SMURF1-203ENST00000472627 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
SMURF1-203ENST00000472627 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
SMURF1-203ENST00000472627 DLEC1Q9Y238 1755 aa19.11■□□□□ 0.65
SMURF1-203ENST00000472627 NFKBIEO00221 500 aa19.1■□□□□ 0.65
SMURF1-203ENST00000472627 DNAJC10Q8IXB1 793 aa19.1■□□□□ 0.65
SMURF1-203ENST00000472627 IQCA1LA6NCM1 817 aa19.08■□□□□ 0.64
SMURF1-203ENST00000472627 CTCFP49711 727 aaPredicted RBP19.08■□□□□ 0.64
SMURF1-203ENST00000472627 POLR3GLQ9BT43 218 aa19.08■□□□□ 0.64
SMURF1-203ENST00000472627 CYP19A1P11511 503 aaPredicted RBP19.07■□□□□ 0.64
SMURF1-203ENST00000472627 PDE6BP35913 854 aa19.07■□□□□ 0.64
SMURF1-203ENST00000472627 AKAP4Q5JQC9 854 aa19.07■□□□□ 0.64
SMURF1-203ENST00000472627 ZNF622Q969S3 477 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMURF1-203ENST00000472627 SLC52A2Q9HAB3 445 aa19.07■□□□□ 0.64
SMURF1-203ENST00000472627 NRXN2Q9P2S2 1712 aa19.07■□□□□ 0.64
SMURF1-203ENST00000472627 ADAMTS7Q9UKP4 1686 aa19.07■□□□□ 0.64
SMURF1-203ENST00000472627 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
SMURF1-203ENST00000472627 A0A087WZG4 1122 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 POTECB2RU33 542 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 TAOK3Q9H2K8 898 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
SMURF1-203ENST00000472627 FOXN1O15353 648 aa19.05■□□□□ 0.64
SMURF1-203ENST00000472627 AEBP1Q8IUX7 1158 aa19.05■□□□□ 0.64
SMURF1-203ENST00000472627 NPHP1O15259 732 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 C21orf2O43822 256 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 CCDC88AQ3V6T2 1871 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 BRIP1Q9BX63 1249 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 ZBTB1Q9Y2K1 713 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
SMURF1-203ENST00000472627 LTBP3Q9NS15 1303 aa19.03■□□□□ 0.64
SMURF1-203ENST00000472627 STARD3NLO95772 234 aa19.03■□□□□ 0.64
SMURF1-203ENST00000472627 BICDL1Q6ZP65 573 aa19.03■□□□□ 0.64
SMURF1-203ENST00000472627 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
SMURF1-203ENST00000472627 LDHDQ86WU2 507 aa19.03■□□□□ 0.64
SMURF1-203ENST00000472627 SLC34A2O95436 690 aa19.02■□□□□ 0.64
SMURF1-203ENST00000472627 CNKSR1Q969H4 720 aa19.02■□□□□ 0.64
SMURF1-203ENST00000472627 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
SMURF1-203ENST00000472627 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
SMURF1-203ENST00000472627 CANXP27824 592 aaKnown RBP19.01■□□□□ 0.63
SMURF1-203ENST00000472627 MORC1Q86VD1 984 aa19.01■□□□□ 0.63
SMURF1-203ENST00000472627 BCL2L12Q9HB09 334 aa19.01■□□□□ 0.63
SMURF1-203ENST00000472627 TMEM88BA6NKF7 163 aa19■□□□□ 0.63
SMURF1-203ENST00000472627 TTC5Q8N0Z6 440 aa19■□□□□ 0.63
SMURF1-203ENST00000472627 MRC1P22897 1456 aa19■□□□□ 0.63
SMURF1-203ENST00000472627 DICER1Q9UPY3 1922 aaKnown RBP19■□□□□ 0.63
SMURF1-203ENST00000472627 DDNO94850 711 aaPredicted RBP18.99■□□□□ 0.63
SMURF1-203ENST00000472627 SLC39A6Q13433 755 aa18.99■□□□□ 0.63
SMURF1-203ENST00000472627 ST5P78524 1137 aa18.98■□□□□ 0.63
SMURF1-203ENST00000472627 PASKQ96RG2 1323 aa18.98■□□□□ 0.63
SMURF1-203ENST00000472627 RNMTO43148 476 aaKnown RBP18.97■□□□□ 0.63
SMURF1-203ENST00000472627 VEGFBP49765 207 aa18.97■□□□□ 0.63
SMURF1-203ENST00000472627 STYK1Q6J9G0 422 aa18.97■□□□□ 0.63
SMURF1-203ENST00000472627 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
SMURF1-203ENST00000472627 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
SMURF1-203ENST00000472627 POTEIP0CG38 1075 aa18.96■□□□□ 0.63
SMURF1-203ENST00000472627 POTEJP0CG39 1038 aa18.96■□□□□ 0.63
SMURF1-203ENST00000472627 LBX1P52954 281 aa18.96■□□□□ 0.63
SMURF1-203ENST00000472627 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
SMURF1-203ENST00000472627 PRR5LQ6MZQ0 368 aa18.96■□□□□ 0.63
SMURF1-203ENST00000472627 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
SMURF1-203ENST00000472627 TEX13AQ9BXU3 409 aaPredicted RBP18.96■□□□□ 0.63
SMURF1-203ENST00000472627 TAF1DQ9H5J8 278 aaPredicted RBP18.96■□□□□ 0.63
SMURF1-203ENST00000472627 LGR6Q9HBX8 967 aa18.96■□□□□ 0.63
SMURF1-203ENST00000472627 IL13P35225 146 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 MAP2K1Q02750 393 aaPredicted RBP18.95■□□□□ 0.62
SMURF1-203ENST00000472627 EAPPQ56P03 285 aaPredicted RBP18.95■□□□□ 0.62
SMURF1-203ENST00000472627 TBC1D9BQ66K14 1250 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 PRPF40BQ6NWY9 871 aaKnown RBP18.95■□□□□ 0.62
SMURF1-203ENST00000472627 MASTLQ96GX5 879 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 SETDB2Q96T68 719 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 PANK3Q9H999 370 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 WBP1LQ9NX94 342 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 CLEC11AQ9Y240 323 aa18.95■□□□□ 0.62
SMURF1-203ENST00000472627 ZNF330Q9Y3S2 320 aaPredicted RBP18.95■□□□□ 0.62
SMURF1-203ENST00000472627 SCN4AP35499 1836 aa18.94■□□□□ 0.62
SMURF1-203ENST00000472627 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
SMURF1-203ENST00000472627 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
SMURF1-203ENST00000472627 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
SMURF1-203ENST00000472627 HACL1Q9UJ83 578 aa18.93■□□□□ 0.62
SMURF1-203ENST00000472627 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
SMURF1-203ENST00000472627 BEGAINQ9BUH8 593 aa18.92■□□□□ 0.62
SMURF1-203ENST00000472627 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
SMURF1-203ENST00000472627 SCN7AQ01118 1682 aa18.92■□□□□ 0.62
SMURF1-203ENST00000472627 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
SMURF1-203ENST00000472627 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
SMURF1-203ENST00000472627 SRGNP10124 158 aa18.91■□□□□ 0.62
SMURF1-203ENST00000472627 IL6STP40189 918 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms