RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 SIPA1L3O60292 1781 aaPredicted RBP25.65■■□□□ 1.7
RHBDF1-207ENST00000472390 HSPA6P17066 643 aa25.65■■□□□ 1.7
RHBDF1-207ENST00000472390 BCL2L12Q9HB09 334 aa25.64■■□□□ 1.7
RHBDF1-207ENST00000472390 NRXN2Q9P2S2 1712 aa25.63■■□□□ 1.69
RHBDF1-207ENST00000472390 TM4SF1P30408 202 aa25.63■■□□□ 1.69
RHBDF1-207ENST00000472390 CARMIL3Q8ND23 1372 aa25.62■■□□□ 1.69
RHBDF1-207ENST00000472390 U2SURPO15042 1029 aaKnown RBP25.62■■□□□ 1.69
RHBDF1-207ENST00000472390 C9orf131Q5VYM1 1079 aa25.62■■□□□ 1.69
RHBDF1-207ENST00000472390 NFIXQ14938 502 aa25.61■■□□□ 1.69
RHBDF1-207ENST00000472390 PIM2Q9P1W9 311 aa25.61■■□□□ 1.69
RHBDF1-207ENST00000472390 SBF1O95248 1867 aa25.6■■□□□ 1.69
RHBDF1-207ENST00000472390 DLEC1Q9Y238 1755 aa25.6■■□□□ 1.69
RHBDF1-207ENST00000472390 ZPR1O75312 459 aa25.6■■□□□ 1.69
RHBDF1-207ENST00000472390 CANXP27824 592 aaKnown RBP25.6■■□□□ 1.69
RHBDF1-207ENST00000472390 DALRD3Q5D0E6 543 aaKnown RBP25.59■■□□□ 1.69
RHBDF1-207ENST00000472390 RASSF7Q02833 373 aa25.58■■□□□ 1.69
RHBDF1-207ENST00000472390 NARFQ9UHQ1 456 aa25.58■■□□□ 1.69
RHBDF1-207ENST00000472390 SCN7AQ01118 1682 aa25.58■■□□□ 1.68
RHBDF1-207ENST00000472390 IL17REQ8NFR9 667 aa25.57■■□□□ 1.68
RHBDF1-207ENST00000472390 ANKRD31Q8N7Z5 1873 aa25.57■■□□□ 1.68
RHBDF1-207ENST00000472390 BICDL1Q6ZP65 573 aa25.56■■□□□ 1.68
RHBDF1-207ENST00000472390 ZNF496Q96IT1 587 aaPredicted RBP25.56■■□□□ 1.68
RHBDF1-207ENST00000472390 RNF181Q9P0P0 153 aa25.56■■□□□ 1.68
RHBDF1-207ENST00000472390 COL11A2P13942 1736 aaPredicted RBP25.55■■□□□ 1.68
RHBDF1-207ENST00000472390 KCNQ3O43525 872 aa25.54■■□□□ 1.68
RHBDF1-207ENST00000472390 CCDC24Q8N4L8 307 aa25.54■■□□□ 1.68
RHBDF1-207ENST00000472390 SERPINB2P05120 415 aa25.53■■□□□ 1.68
RHBDF1-207ENST00000472390 PRELPP51888 382 aa25.53■■□□□ 1.68
RHBDF1-207ENST00000472390 PHACTR3Q96KR7 559 aa25.53■■□□□ 1.68
RHBDF1-207ENST00000472390 ZNF330Q9Y3S2 320 aaPredicted RBP25.53■■□□□ 1.68
RHBDF1-207ENST00000472390 NPC1L1Q9UHC9 1359 aa25.53■■□□□ 1.68
RHBDF1-207ENST00000472390 TTC5Q8N0Z6 440 aa25.52■■□□□ 1.68
RHBDF1-207ENST00000472390 HEG1Q9ULI3 1381 aa25.51■■□□□ 1.67
RHBDF1-207ENST00000472390 TIAM2Q8IVF5 1701 aa25.51■■□□□ 1.67
RHBDF1-207ENST00000472390 CCDC88AQ3V6T2 1871 aa25.51■■□□□ 1.67
RHBDF1-207ENST00000472390 GNAT3A8MTJ3 354 aa25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 PIP4K2AP48426 406 aaPredicted RBP25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 HTRA3P83110 453 aa25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 VSIG10Q8N0Z9 540 aa25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 WDR90Q96KV7 1748 aa25.5■■□□□ 1.67
RHBDF1-207ENST00000472390 TOMM70O94826 608 aa25.49■■□□□ 1.67
RHBDF1-207ENST00000472390 EIF5P55010 431 aaKnown RBP25.49■■□□□ 1.67
RHBDF1-207ENST00000472390 TEFQ10587 303 aa25.49■■□□□ 1.67
RHBDF1-207ENST00000472390 TBC1D9BQ66K14 1250 aa25.49■■□□□ 1.67
RHBDF1-207ENST00000472390 ZNF790Q6PG37 636 aa25.49■■□□□ 1.67
RHBDF1-207ENST00000472390 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
RHBDF1-207ENST00000472390 TBC1D2BQ9UPU7 963 aa25.48■■□□□ 1.67
RHBDF1-207ENST00000472390 CACNA1SQ13698 1873 aa25.48■■□□□ 1.67
RHBDF1-207ENST00000472390 TNRC6CQ9HCJ0 1690 aaKnown RBP25.48■■□□□ 1.67
RHBDF1-207ENST00000472390 BCORQ6W2J9 1755 aa25.47■■□□□ 1.67
RHBDF1-207ENST00000472390 A1BGP04217 495 aa25.47■■□□□ 1.67
RHBDF1-207ENST00000472390 C2CD5Q86YS7 1000 aa25.47■■□□□ 1.67
RHBDF1-207ENST00000472390 GAS2L2Q8NHY3 880 aa25.47■■□□□ 1.67
RHBDF1-207ENST00000472390 PRAMEF22A3QJZ6 481 aa25.46■■□□□ 1.67
RHBDF1-207ENST00000472390 CEMIPQ8WUJ3 1361 aa25.45■■□□□ 1.67
RHBDF1-207ENST00000472390 RRAGCQ9HB90 399 aa25.45■■□□□ 1.66
RHBDF1-207ENST00000472390 ZNF219Q9P2Y4 722 aaPredicted RBP25.45■■□□□ 1.66
RHBDF1-207ENST00000472390 STARD3NLO95772 234 aa25.44■■□□□ 1.66
RHBDF1-207ENST00000472390 NFKBIEO00221 500 aa25.42■■□□□ 1.66
RHBDF1-207ENST00000472390 APLP1P51693 650 aa25.41■■□□□ 1.66
RHBDF1-207ENST00000472390 DCTN1Q14203 1278 aa25.41■■□□□ 1.66
RHBDF1-207ENST00000472390 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
RHBDF1-207ENST00000472390 MCM10Q7L590 875 aa25.41■■□□□ 1.66
RHBDF1-207ENST00000472390 FMNL2Q96PY5 1086 aa25.41■■□□□ 1.66
RHBDF1-207ENST00000472390 PPP2R1AP30153 589 aa25.4■■□□□ 1.66
RHBDF1-207ENST00000472390 IFFO2Q5TF58 517 aa25.4■■□□□ 1.66
RHBDF1-207ENST00000472390 DNAJC5GQ8N7S2 189 aa25.4■■□□□ 1.66
RHBDF1-207ENST00000472390 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
RHBDF1-207ENST00000472390 RBM46Q8TBY0 533 aaKnown RBP25.4■■□□□ 1.66
RHBDF1-207ENST00000472390 BTBD11A6QL63 1104 aa25.39■■□□□ 1.66
RHBDF1-207ENST00000472390 CAMTA2O94983 1202 aa25.39■■□□□ 1.66
RHBDF1-207ENST00000472390 USP16Q9Y5T5 823 aa25.39■■□□□ 1.66
RHBDF1-207ENST00000472390 KDM2BQ8NHM5 1336 aa25.38■■□□□ 1.65
RHBDF1-207ENST00000472390 A0A087WZG4 1122 aa25.38■■□□□ 1.65
RHBDF1-207ENST00000472390 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
RHBDF1-207ENST00000472390 SLX4Q8IY92 1834 aa25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 FER1L6Q2WGJ9 1857 aa25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 H0YIN7 160 aa25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 IL6STP40189 918 aaPredicted RBP25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 ZNF622Q969S3 477 aaKnown RBP eCLIP25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 CFAP53Q96M91 514 aa25.37■■□□□ 1.65
RHBDF1-207ENST00000472390 C21orf2O43822 256 aa25.35■■□□□ 1.65
RHBDF1-207ENST00000472390 LMNB1P20700 586 aa25.35■■□□□ 1.65
RHBDF1-207ENST00000472390 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
RHBDF1-207ENST00000472390 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
RHBDF1-207ENST00000472390 TEX13AQ9BXU3 409 aaPredicted RBP25.33■■□□□ 1.65
RHBDF1-207ENST00000472390 DICER1Q9UPY3 1922 aaKnown RBP25.32■■□□□ 1.64
RHBDF1-207ENST00000472390 ARFGEF2Q9Y6D5 1785 aa25.32■■□□□ 1.64
RHBDF1-207ENST00000472390 CNBD1Q8NA66 436 aa25.31■■□□□ 1.64
RHBDF1-207ENST00000472390 BRIP1Q9BX63 1249 aa25.31■■□□□ 1.64
RHBDF1-207ENST00000472390 MIS18AQ9NYP9 233 aa25.31■■□□□ 1.64
RHBDF1-207ENST00000472390 LAMB4A4D0S4 1761 aa25.31■■□□□ 1.64
RHBDF1-207ENST00000472390 NBPF26B4DH59 902 aa25.3■■□□□ 1.64
RHBDF1-207ENST00000472390 NBPF10Q6P3W6 841 aaKnown RBP25.3■■□□□ 1.64
RHBDF1-207ENST00000472390 NBPF15Q8N660 670 aa25.3■■□□□ 1.64
RHBDF1-207ENST00000472390 SETDB2Q96T68 719 aa25.29■■□□□ 1.64
RHBDF1-207ENST00000472390 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms