RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	FAM98C	Q17RN3	349 aa	Known RBP	13.58	□□□□□ -0.24
MRPS18B-208	ENST00000472267	BARGIN	Q6ZT62	677 aa		13.58	□□□□□ -0.24
MRPS18B-208	ENST00000472267	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PAPPA	Q13219	1627 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267		A0A0G2JS52	829 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PIGB	Q92521	554 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	SYTL4	Q96C24	671 aa	Predicted RBP	13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	USP16	Q9Y5T5	823 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	MYL6B	P14649	208 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	MYT1	Q01538	1121 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	HYPK	Q9NX55	129 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	UBR2	Q8IWV8	1755 aa		13.57	□□□□□ -0.24
MRPS18B-208	ENST00000472267	AIMP1	Q12904	312 aa	Known RBP	13.56	□□□□□ -0.24
MRPS18B-208	ENST00000472267	ASAP1	Q9ULH1	1129 aa		13.56	□□□□□ -0.24
MRPS18B-208	ENST00000472267	DOT1L	Q8TEK3	1739 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	KCP	Q6ZWJ8	1503 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PI4KAP2	A4QPH2	592 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PIP4K2A	P48426	406 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PDIA6	Q15084	440 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PI4KAP1	Q8N8J0	262 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	MARCH10	Q8NA82	808 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	MEIS3	Q99687	375 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	LAMB4	A4D0S4	1761 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	GLI3	P10071	1580 aa		13.55	□□□□□ -0.24
MRPS18B-208	ENST00000472267	AFF2	P51816	1311 aa		13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PRIM1	P49642	420 aa	Known RBP	13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	HDAC1	Q13547	482 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	DNAAF4	Q8WXU2	420 aa		13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	ACSBG1	Q96GR2	724 aa		13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.54	□□□□□ -0.24
MRPS18B-208	ENST00000472267	RBM42	Q9BTD8	480 aa	Known RBP	13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	TSHZ2	Q9NRE2	1034 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	ATG3	Q9NT62	314 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	ADCY9	O60503	1353 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	PXDNL	A1KZ92	1463 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	DDX58	O95786	925 aa	Known RBP	13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	RGS3	P49796	1198 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	XAGE3	Q8WTP9	111 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	MAP3K2	Q9Y2U5	619 aa		13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPS18B-208	ENST00000472267	BCL9	O00512	1426 aa		13.52	□□□□□ -0.24
MRPS18B-208	ENST00000472267	KSR2	Q6VAB6	950 aa		13.52	□□□□□ -0.25
MRPS18B-208	ENST00000472267	SRCIN1	Q9C0H9	1055 aa		13.52	□□□□□ -0.25
MRPS18B-208	ENST00000472267	COPS6	Q7L5N1	327 aa		13.51	□□□□□ -0.25
MRPS18B-208	ENST00000472267	RIC3	Q7Z5B4	369 aa		13.51	□□□□□ -0.25
MRPS18B-208	ENST00000472267	PDZRN3	Q9UPQ7	1066 aa		13.51	□□□□□ -0.25
MRPS18B-208	ENST00000472267	A1BG	P04217	495 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	GNAI3	P08754	354 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	BEND3	Q5T5X7	828 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	SIRT2	Q8IXJ6	389 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	GNAI2	P04899	355 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	DNAJC10	Q8IXB1	793 aa		13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	GJD4	Q96KN9	370 aa	Predicted RBP	13.5	□□□□□ -0.25
MRPS18B-208	ENST00000472267	NBPF26	B4DH59	902 aa		13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	NBPF14	Q5TI25	921 aa		13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	CEP85	Q6P2H3	762 aa		13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	NBPF10	Q6P3W6	841 aa	Known RBP	13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	NBPF15	Q8N660	670 aa		13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ANKRD44	Q8N8A2	993 aa		13.49	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ERBB4	Q15303	1308 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	UBTFL1	P0CB47	393 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	LRP10	Q7Z4F1	713 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	SMC5	Q8IY18	1101 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	VSIG10	Q8N0Z9	540 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	USP44	Q9H0E7	712 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	TRPC5	Q9UL62	973 aa	Predicted RBP	13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ATP10D	Q9P241	1426 aa		13.48	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ATRN	O75882	1429 aa		13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	CWF19L2	Q2TBE0	894 aa	Known RBP	13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ANKRD13D	Q6ZTN6	518 aa		13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	LRRFIP2	Q9Y608	721 aa	Known RBP	13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	THSD7A	Q9UPZ6	1657 aa		13.47	□□□□□ -0.25
MRPS18B-208	ENST00000472267	KCNQ2	O43526	872 aa		13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	ALDH1L1	O75891	902 aa		13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	STARD3NL	O95772	234 aa		13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	NEXN	Q0ZGT2	675 aa		13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	MYD88	Q99836	296 aa		13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	QTRT2	Q9H974	415 aa	Known RBP	13.46	□□□□□ -0.25
MRPS18B-208	ENST00000472267	LINS1	Q8NG48	757 aa		13.46	□□□□□ -0.26
MRPS18B-208	ENST00000472267	GCC1	Q96CN9	775 aa		13.46	□□□□□ -0.26
MRPS18B-208	ENST00000472267	SLC4A9	Q96Q91	983 aa		13.46	□□□□□ -0.26
MRPS18B-208	ENST00000472267	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.46	□□□□□ -0.26
MRPS18B-208	ENST00000472267	HMMR	O75330	724 aa		13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	FAM182B	Q5T319	152 aa		13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ANKRD45	Q5TZF3	282 aa		13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	TTLL7	Q6ZT98	887 aa		13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	METTL22	Q9BUU2	404 aa	Predicted RBP	13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ARFGEF2	Q9Y6D5	1785 aa		13.45	□□□□□ -0.26
MRPS18B-208	ENST00000472267	NUCB1	Q02818	461 aa		13.44	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PLBD2	Q8NHP8	589 aa		13.44	□□□□□ -0.26
MRPS18B-208	ENST00000472267	BCL11A	Q9H165	835 aa		13.44	□□□□□ -0.26
MRPS18B-208	ENST00000472267	AFDN	P55196	1824 aa	Known RBP	13.44	□□□□□ -0.26
MRPS18B-208	ENST00000472267	IGKV5-2	P06315	115 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	SEPT12	Q8IYM1	358 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 136 ms