RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 DDR1Q08345 913 aa15.37■□□□□ 0.05
COL4A3-205ENST00000471862 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
COL4A3-205ENST00000471862 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
COL4A3-205ENST00000471862 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
COL4A3-205ENST00000471862 KCNQ3O43525 872 aa15.36■□□□□ 0.05
COL4A3-205ENST00000471862 HTATSF1O43719 755 aaKnown RBP15.36■□□□□ 0.05
COL4A3-205ENST00000471862 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
COL4A3-205ENST00000471862 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
COL4A3-205ENST00000471862 NARFQ9UHQ1 456 aa15.36■□□□□ 0.05
COL4A3-205ENST00000471862 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 POLRMTO00411 1230 aaKnown RBP15.35■□□□□ 0.05
COL4A3-205ENST00000471862 STARD3NLO95772 234 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 EIF5P55010 431 aaKnown RBP15.35■□□□□ 0.05
COL4A3-205ENST00000471862 MCM10Q7L590 875 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 TEX13AQ9BXU3 409 aaPredicted RBP15.35■□□□□ 0.05
COL4A3-205ENST00000471862 BCL2L12Q9HB09 334 aa15.35■□□□□ 0.05
COL4A3-205ENST00000471862 ZPR1O75312 459 aa15.34■□□□□ 0.05
COL4A3-205ENST00000471862 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
COL4A3-205ENST00000471862 RALBP1Q15311 655 aa15.34■□□□□ 0.05
COL4A3-205ENST00000471862 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
COL4A3-205ENST00000471862 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
COL4A3-205ENST00000471862 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
COL4A3-205ENST00000471862 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
COL4A3-205ENST00000471862 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
COL4A3-205ENST00000471862 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.04
COL4A3-205ENST00000471862 ADCY9O60503 1353 aa15.33■□□□□ 0.04
COL4A3-205ENST00000471862 A0A0G2JLW4 131 aa15.32■□□□□ 0.04
COL4A3-205ENST00000471862 DPEP1P16444 411 aa15.32■□□□□ 0.04
COL4A3-205ENST00000471862 KCNA3P22001 575 aa15.32■□□□□ 0.04
COL4A3-205ENST00000471862 NFIXQ14938 502 aa15.32■□□□□ 0.04
COL4A3-205ENST00000471862 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
COL4A3-205ENST00000471862 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
COL4A3-205ENST00000471862 A0A087WZG4 1122 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 LAMB4A4D0S4 1761 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 A1BGP04217 495 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 NFE2L2Q16236 605 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 DLEC1Q9Y238 1755 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 USP16Q9Y5T5 823 aa15.3■□□□□ 0.04
COL4A3-205ENST00000471862 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
COL4A3-205ENST00000471862 PRAMEF22A3QJZ6 481 aa15.29■□□□□ 0.04
COL4A3-205ENST00000471862 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
COL4A3-205ENST00000471862 ATP10DQ9P241 1426 aa15.28■□□□□ 0.04
COL4A3-205ENST00000471862 NEFMP07197 916 aa15.28■□□□□ 0.04
COL4A3-205ENST00000471862 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
COL4A3-205ENST00000471862 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
COL4A3-205ENST00000471862 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.04
COL4A3-205ENST00000471862 SERPINB2P05120 415 aa15.27■□□□□ 0.04
COL4A3-205ENST00000471862 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
COL4A3-205ENST00000471862 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
COL4A3-205ENST00000471862 CAMTA2O94983 1202 aa15.26■□□□□ 0.03
COL4A3-205ENST00000471862 TBC1D9BQ66K14 1250 aa15.26■□□□□ 0.03
COL4A3-205ENST00000471862 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
COL4A3-205ENST00000471862 TBC1D2BQ9UPU7 963 aa15.26■□□□□ 0.03
COL4A3-205ENST00000471862 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
COL4A3-205ENST00000471862 CHRNA5P30532 468 aa15.25■□□□□ 0.03
COL4A3-205ENST00000471862 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
COL4A3-205ENST00000471862 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
COL4A3-205ENST00000471862 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
COL4A3-205ENST00000471862 ZNF330Q9Y3S2 320 aaPredicted RBP15.25■□□□□ 0.03
COL4A3-205ENST00000471862 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
COL4A3-205ENST00000471862 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
COL4A3-205ENST00000471862 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
COL4A3-205ENST00000471862 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
COL4A3-205ENST00000471862 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
COL4A3-205ENST00000471862 BICDL1Q6ZP65 573 aa15.23■□□□□ 0.03
COL4A3-205ENST00000471862 COL11A2P13942 1736 aaPredicted RBP15.23■□□□□ 0.03
COL4A3-205ENST00000471862 C1QTNF8P60827 252 aa15.22■□□□□ 0.03
COL4A3-205ENST00000471862 EIF4A1P60842 406 aaKnown RBP15.22■□□□□ 0.03
COL4A3-205ENST00000471862 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
COL4A3-205ENST00000471862 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
COL4A3-205ENST00000471862 SBF1O95248 1867 aa15.22■□□□□ 0.03
COL4A3-205ENST00000471862 RGL2O15211 777 aa15.21■□□□□ 0.03
COL4A3-205ENST00000471862 GIGYF1O75420 1035 aaPredicted RBP15.21■□□□□ 0.03
COL4A3-205ENST00000471862 TMPOP42166 694 aaKnown RBP15.21■□□□□ 0.03
COL4A3-205ENST00000471862 PRR5LQ6MZQ0 368 aa15.21■□□□□ 0.03
COL4A3-205ENST00000471862 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
COL4A3-205ENST00000471862 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
COL4A3-205ENST00000471862 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
COL4A3-205ENST00000471862 RIPK4P57078 832 aa15.2■□□□□ 0.02
COL4A3-205ENST00000471862 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
COL4A3-205ENST00000471862 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
COL4A3-205ENST00000471862 NUP98P52948 1817 aa15.18■□□□□ 0.02
COL4A3-205ENST00000471862 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
COL4A3-205ENST00000471862 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-205ENST00000471862 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
COL4A3-205ENST00000471862 ARFGEF2Q9Y6D5 1785 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 PDZRN3Q9UPQ7 1066 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
COL4A3-205ENST00000471862 H0YIN7 160 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 PDE6BP35913 854 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL4A3-205ENST00000471862 C9orf131Q5VYM1 1079 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms