RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
GCOM1-206ENST00000471563 GCC1Q96CN9 775 aa18.84■□□□□ 0.61
GCOM1-206ENST00000471563 PI4KAP2A4QPH2 592 aa18.84■□□□□ 0.61
GCOM1-206ENST00000471563 PI4KAP1Q8N8J0 262 aa18.84■□□□□ 0.61
GCOM1-206ENST00000471563 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
GCOM1-206ENST00000471563 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
GCOM1-206ENST00000471563 UBE2Q2Q8WVN8 375 aa18.83■□□□□ 0.61
GCOM1-206ENST00000471563 DBF4Q9UBU7 674 aaPredicted RBP18.83■□□□□ 0.61
GCOM1-206ENST00000471563 DDX11L8A8MPP1 907 aa18.83■□□□□ 0.6
GCOM1-206ENST00000471563 CABP4P57796 275 aa18.83■□□□□ 0.6
GCOM1-206ENST00000471563 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
GCOM1-206ENST00000471563 PCDH11XQ9BZA7 1347 aa18.82■□□□□ 0.6
GCOM1-206ENST00000471563 PCDH11YQ9BZA8 1340 aa18.82■□□□□ 0.6
GCOM1-206ENST00000471563 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
GCOM1-206ENST00000471563 PIP4K2BP78356 416 aa18.82■□□□□ 0.6
GCOM1-206ENST00000471563 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
GCOM1-206ENST00000471563 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
GCOM1-206ENST00000471563 DDIT3P35638 169 aa18.81■□□□□ 0.6
GCOM1-206ENST00000471563 RBM25P49756 843 aaKnown RBP18.81■□□□□ 0.6
GCOM1-206ENST00000471563 RPAP2Q8IXW5 612 aaPredicted RBP18.81■□□□□ 0.6
GCOM1-206ENST00000471563 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
GCOM1-206ENST00000471563 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
GCOM1-206ENST00000471563 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
GCOM1-206ENST00000471563 MRC1P22897 1456 aa18.81■□□□□ 0.6
GCOM1-206ENST00000471563 MRE11P49959 708 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 PDIA6Q15084 440 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 SNX21Q969T3 373 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 ADCY9O60503 1353 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 ARXQ96QS3 562 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 PANK2Q9BZ23 570 aa18.8■□□□□ 0.6
GCOM1-206ENST00000471563 GNAI2P04899 355 aa18.79■□□□□ 0.6
GCOM1-206ENST00000471563 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
GCOM1-206ENST00000471563 TTC5Q8N0Z6 440 aa18.79■□□□□ 0.6
GCOM1-206ENST00000471563 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
GCOM1-206ENST00000471563 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
GCOM1-206ENST00000471563 APBB1O00213 710 aa18.79■□□□□ 0.6
GCOM1-206ENST00000471563 ISY1Q9ULR0 285 aaKnown RBP18.79■□□□□ 0.6
GCOM1-206ENST00000471563 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
GCOM1-206ENST00000471563 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
GCOM1-206ENST00000471563 C5P01031 1676 aa18.78■□□□□ 0.6
GCOM1-206ENST00000471563 PXDNLA1KZ92 1463 aa18.78■□□□□ 0.6
GCOM1-206ENST00000471563 MYL6BP14649 208 aa18.77■□□□□ 0.6
GCOM1-206ENST00000471563 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
GCOM1-206ENST00000471563 BEND3Q5T5X7 828 aa18.77■□□□□ 0.6
GCOM1-206ENST00000471563 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
GCOM1-206ENST00000471563 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
GCOM1-206ENST00000471563 CIZ1Q9ULV3 898 aaPredicted RBP18.77■□□□□ 0.6
GCOM1-206ENST00000471563 MAP3K2Q9Y2U5 619 aa18.77■□□□□ 0.6
GCOM1-206ENST00000471563 PNMA6EA0A0J9YXQ4 647 aa18.76■□□□□ 0.59
GCOM1-206ENST00000471563 GNAI3P08754 354 aa18.76■□□□□ 0.59
GCOM1-206ENST00000471563 CLCN1P35523 988 aa18.76■□□□□ 0.59
GCOM1-206ENST00000471563 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
GCOM1-206ENST00000471563 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
GCOM1-206ENST00000471563 SHANK3Q9BYB0 1731 aa18.76■□□□□ 0.59
GCOM1-206ENST00000471563 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
GCOM1-206ENST00000471563 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
GCOM1-206ENST00000471563 SMARCA5O60264 1052 aaPredicted RBP18.75■□□□□ 0.59
GCOM1-206ENST00000471563 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
GCOM1-206ENST00000471563 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
GCOM1-206ENST00000471563 HYPKQ9NX55 129 aa18.75■□□□□ 0.59
GCOM1-206ENST00000471563 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
GCOM1-206ENST00000471563 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
GCOM1-206ENST00000471563 COL22A1Q8NFW1 1626 aaPredicted RBP18.75■□□□□ 0.59
GCOM1-206ENST00000471563 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
GCOM1-206ENST00000471563 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
GCOM1-206ENST00000471563 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
GCOM1-206ENST00000471563 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
GCOM1-206ENST00000471563 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
GCOM1-206ENST00000471563 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
GCOM1-206ENST00000471563 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
GCOM1-206ENST00000471563 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
GCOM1-206ENST00000471563 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
GCOM1-206ENST00000471563 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
GCOM1-206ENST00000471563 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
GCOM1-206ENST00000471563 CWF19L2Q2TBE0 894 aaKnown RBP18.73■□□□□ 0.59
GCOM1-206ENST00000471563 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
GCOM1-206ENST00000471563 TOM1O60784 492 aa18.72■□□□□ 0.59
GCOM1-206ENST00000471563 HMMRO75330 724 aa18.72■□□□□ 0.59
GCOM1-206ENST00000471563 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
GCOM1-206ENST00000471563 ATP8B2P98198 1209 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 LRP10Q7Z4F1 713 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 XAGE3Q8WTP9 111 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 TNPO1Q92973 898 aaKnown RBP18.71■□□□□ 0.59
GCOM1-206ENST00000471563 GLI3P10071 1580 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 COPS6Q7L5N1 327 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
GCOM1-206ENST00000471563 PTMSP20962 102 aa18.7■□□□□ 0.58
GCOM1-206ENST00000471563 RAB3GAP1Q15042 981 aa18.7■□□□□ 0.58
GCOM1-206ENST00000471563 GBP4Q96PP9 640 aa18.7■□□□□ 0.58
GCOM1-206ENST00000471563 DISP2A7MBM2 1401 aa18.69■□□□□ 0.58
GCOM1-206ENST00000471563 UBAP1LF5GYI3 381 aa18.69■□□□□ 0.58
GCOM1-206ENST00000471563 KIF2CQ99661 725 aa18.69■□□□□ 0.58
GCOM1-206ENST00000471563 TOGARAM1Q9Y4F4 1720 aa18.68■□□□□ 0.58
GCOM1-206ENST00000471563 SKOR2Q2VWA4 1001 aaPredicted RBP18.68■□□□□ 0.58
GCOM1-206ENST00000471563 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
GCOM1-206ENST00000471563 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
GCOM1-206ENST00000471563 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
GCOM1-206ENST00000471563 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
GCOM1-206ENST00000471563 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
GCOM1-206ENST00000471563 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms