RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 PAPPAQ13219 1627 aa15.12■□□□□ 0.01
LINC00880-201ENST00000471357 PTCD1O75127 700 aaKnown RBP15.12■□□□□ 0.01
LINC00880-201ENST00000471357 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
LINC00880-201ENST00000471357 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
LINC00880-201ENST00000471357 C5P01031 1676 aa15.12■□□□□ 0.01
LINC00880-201ENST00000471357 BCL9O00512 1426 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 KCPQ6ZWJ8 1503 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 IGHDP01880 384 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
LINC00880-201ENST00000471357 PDIA6Q15084 440 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 PROSER3Q2NL68 480 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
LINC00880-201ENST00000471357 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 ITGB4P16144 1822 aa15.11■□□□□ 0.01
LINC00880-201ENST00000471357 A0A0G2JS52 829 aa15.1■□□□□ 0.01
LINC00880-201ENST00000471357 MYT1Q01538 1121 aa15.1■□□□□ 0.01
LINC00880-201ENST00000471357 RWDD1Q9H446 243 aaPredicted RBP15.1■□□□□ 0.01
LINC00880-201ENST00000471357 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
LINC00880-201ENST00000471357 GLI3P10071 1580 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 ATRNO75882 1429 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 ACSBG1Q96GR2 724 aa15.09■□□□□ 0.01
LINC00880-201ENST00000471357 PXDNLA1KZ92 1463 aa15.08■□□□□ 0
LINC00880-201ENST00000471357 ERBB4Q15303 1308 aa15.08■□□□□ 0
LINC00880-201ENST00000471357 MYL6BP14649 208 aa15.08■□□□□ 0
LINC00880-201ENST00000471357 DNAAF4Q8WXU2 420 aa15.08■□□□□ 0
LINC00880-201ENST00000471357 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
LINC00880-201ENST00000471357 DDX58O95786 925 aaKnown RBP15.07■□□□□ 0
LINC00880-201ENST00000471357 KSR2Q6VAB6 950 aa15.07■□□□□ 0
LINC00880-201ENST00000471357 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
LINC00880-201ENST00000471357 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
LINC00880-201ENST00000471357 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
LINC00880-201ENST00000471357 QTRT2Q9H974 415 aaKnown RBP15.07■□□□□ 0
LINC00880-201ENST00000471357 LAMB4A4D0S4 1761 aa15.07■□□□□ 0
LINC00880-201ENST00000471357 ONECUT3O60422 494 aaPredicted RBP15.06■□□□□ 0
LINC00880-201ENST00000471357 AIMP1Q12904 312 aaKnown RBP15.06■□□□□ 0
LINC00880-201ENST00000471357 C1orf115Q9H7X2 142 aa15.06■□□□□ 0
LINC00880-201ENST00000471357 THSD7AQ9UPZ6 1657 aa15.06■□□□□ 0
LINC00880-201ENST00000471357 ADCY9O60503 1353 aa15.06■□□□□ 0
LINC00880-201ENST00000471357 COPS6Q7L5N1 327 aa15.05■□□□□ 0
LINC00880-201ENST00000471357 LRP10Q7Z4F1 713 aa15.05■□□□□ 0
LINC00880-201ENST00000471357 MEIS3Q99687 375 aa15.05■□□□□ 0
LINC00880-201ENST00000471357 SRCIN1Q9C0H9 1055 aa15.05■□□□□ 0
LINC00880-201ENST00000471357 PIP4K2AP48426 406 aaPredicted RBP15.05■□□□□ -0
LINC00880-201ENST00000471357 XAGE3Q8WTP9 111 aa15.05■□□□□ -0
LINC00880-201ENST00000471357 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
LINC00880-201ENST00000471357 BEND3Q5T5X7 828 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 DNAJC10Q8IXB1 793 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 NBPF26B4DH59 902 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 A1BGP04217 495 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 GNAI3P08754 354 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 NBPF14Q5TI25 921 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
LINC00880-201ENST00000471357 NBPF15Q8N660 670 aa15.04■□□□□ -0
LINC00880-201ENST00000471357 ATP10DQ9P241 1426 aa15.03■□□□□ -0
LINC00880-201ENST00000471357 STARD3NLO95772 234 aa15.03■□□□□ -0
LINC00880-201ENST00000471357 RIC3Q7Z5B4 369 aa15.03■□□□□ -0
LINC00880-201ENST00000471357 KCNQ2O43526 872 aa15.02■□□□□ -0
LINC00880-201ENST00000471357 ANKRD13DQ6ZTN6 518 aa15.02■□□□□ -0
LINC00880-201ENST00000471357 SEPT12Q8IYM1 358 aa15.02■□□□□ -0
LINC00880-201ENST00000471357 SLC4A9Q96Q91 983 aa15.02■□□□□ -0
LINC00880-201ENST00000471357 RPAP2Q8IXW5 612 aaPredicted RBP15.02□□□□□ -0.01
LINC00880-201ENST00000471357 USP44Q9H0E7 712 aa15.02□□□□□ -0.01
LINC00880-201ENST00000471357 N4BP2Q86UW6 1770 aaPredicted RBP15.02□□□□□ -0.01
LINC00880-201ENST00000471357 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
LINC00880-201ENST00000471357 GNAI2P04899 355 aa15.01□□□□□ -0.01
LINC00880-201ENST00000471357 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
LINC00880-201ENST00000471357 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
LINC00880-201ENST00000471357 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
LINC00880-201ENST00000471357 LINS1Q8NG48 757 aa15□□□□□ -0.01
LINC00880-201ENST00000471357 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
LINC00880-201ENST00000471357 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
LINC00880-201ENST00000471357 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
LINC00880-201ENST00000471357 NEXNQ0ZGT2 675 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 PLBD2Q8NHP8 589 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 METTL22Q9BUU2 404 aaPredicted RBP14.99□□□□□ -0.01
LINC00880-201ENST00000471357 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 FAM182BQ5T319 152 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 SKAP1Q86WV1 359 aa14.99□□□□□ -0.01
LINC00880-201ENST00000471357 LOC102724428A0A0B4J2F2 783 aa14.98□□□□□ -0.01
LINC00880-201ENST00000471357 ATP6V1AP38606 617 aa14.98□□□□□ -0.01
LINC00880-201ENST00000471357 SIK1P57059 783 aa14.98□□□□□ -0.01
LINC00880-201ENST00000471357 GCC1Q96CN9 775 aa14.98□□□□□ -0.01
LINC00880-201ENST00000471357 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
LINC00880-201ENST00000471357 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
LINC00880-201ENST00000471357 TTLL7Q6ZT98 887 aa14.97□□□□□ -0.01
LINC00880-201ENST00000471357 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
LINC00880-201ENST00000471357 MYD88Q99836 296 aa14.97□□□□□ -0.01
LINC00880-201ENST00000471357 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
LINC00880-201ENST00000471357 C9orf78Q9NZ63 289 aaPredicted RBP14.97□□□□□ -0.01
LINC00880-201ENST00000471357 HMMRO75330 724 aa14.96□□□□□ -0.01
LINC00880-201ENST00000471357 NBPF7P0C2Y1 421 aaPredicted RBP14.96□□□□□ -0.01
LINC00880-201ENST00000471357 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
LINC00880-201ENST00000471357 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms