RNA–Protein interactions for RNA: ENST00000471014.1

CTNNB1-212, Transcript of catenin beta 1, humanhuman

TSL 3

Gene CTNNB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-212ENST00000471014 TM4SF1P30408 202 aa17.3■□□□□ 0.36
CTNNB1-212ENST00000471014 NFIXQ14938 502 aa17.3■□□□□ 0.36
CTNNB1-212ENST00000471014 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
CTNNB1-212ENST00000471014 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
CTNNB1-212ENST00000471014 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
CTNNB1-212ENST00000471014 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
CTNNB1-212ENST00000471014 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
CTNNB1-212ENST00000471014 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
CTNNB1-212ENST00000471014 TEFQ10587 303 aa17.28■□□□□ 0.36
CTNNB1-212ENST00000471014 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
CTNNB1-212ENST00000471014 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
CTNNB1-212ENST00000471014 SERPINB2P05120 415 aa17.27■□□□□ 0.36
CTNNB1-212ENST00000471014 BCL2L12Q9HB09 334 aa17.27■□□□□ 0.36
CTNNB1-212ENST00000471014 CEP350Q5VT06 3117 aa17.27■□□□□ 0.35
CTNNB1-212ENST00000471014 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 TOMM70O94826 608 aa17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
CTNNB1-212ENST00000471014 STARD3NLO95772 234 aa17.25■□□□□ 0.35
CTNNB1-212ENST00000471014 RASSF7Q02833 373 aa17.25■□□□□ 0.35
CTNNB1-212ENST00000471014 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
CTNNB1-212ENST00000471014 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
CTNNB1-212ENST00000471014 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
CTNNB1-212ENST00000471014 APLP1P51693 650 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 EIF5P55010 431 aaKnown RBP17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 UBR2Q8IWV8 1755 aa17.22■□□□□ 0.35
CTNNB1-212ENST00000471014 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 A0A087WZG4 1122 aa17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 KCNQ3O43525 872 aa17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
CTNNB1-212ENST00000471014 A1BGP04217 495 aa17.2■□□□□ 0.34
CTNNB1-212ENST00000471014 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
CTNNB1-212ENST00000471014 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
CTNNB1-212ENST00000471014 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
CTNNB1-212ENST00000471014 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
CTNNB1-212ENST00000471014 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 H0YIN7 160 aa17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 NPHP1O15259 732 aa17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
CTNNB1-212ENST00000471014 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 HTRA3P83110 453 aa17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
CTNNB1-212ENST00000471014 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
CTNNB1-212ENST00000471014 PRELPP51888 382 aa17.17■□□□□ 0.34
CTNNB1-212ENST00000471014 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
CTNNB1-212ENST00000471014 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
CTNNB1-212ENST00000471014 LMNB1P20700 586 aa17.16■□□□□ 0.34
CTNNB1-212ENST00000471014 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
CTNNB1-212ENST00000471014 MCM10Q7L590 875 aa17.16■□□□□ 0.34
CTNNB1-212ENST00000471014 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
CTNNB1-212ENST00000471014 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
CTNNB1-212ENST00000471014 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
CTNNB1-212ENST00000471014 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
CTNNB1-212ENST00000471014 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
CTNNB1-212ENST00000471014 SBF1O95248 1867 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 C21orf2O43822 256 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 CAMTA2O94983 1202 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 DZIP3Q86Y13 1208 aaKnown RBP17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
CTNNB1-212ENST00000471014 DLEC1Q9Y238 1755 aa17.13■□□□□ 0.33
CTNNB1-212ENST00000471014 NFKBIEO00221 500 aa17.13■□□□□ 0.33
CTNNB1-212ENST00000471014 PDE6BP35913 854 aa17.13■□□□□ 0.33
CTNNB1-212ENST00000471014 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
CTNNB1-212ENST00000471014 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
CTNNB1-212ENST00000471014 FSTL1Q12841 308 aa17.12■□□□□ 0.33
CTNNB1-212ENST00000471014 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
CTNNB1-212ENST00000471014 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
CTNNB1-212ENST00000471014 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
CTNNB1-212ENST00000471014 ST5P78524 1137 aa17.11■□□□□ 0.33
CTNNB1-212ENST00000471014 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
CTNNB1-212ENST00000471014 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
CTNNB1-212ENST00000471014 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
CTNNB1-212ENST00000471014 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
CTNNB1-212ENST00000471014 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
CTNNB1-212ENST00000471014 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
CTNNB1-212ENST00000471014 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
CTNNB1-212ENST00000471014 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
CTNNB1-212ENST00000471014 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
CTNNB1-212ENST00000471014 PDZRN3Q9UPQ7 1066 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms