RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
CCM2-204ENST00000470837 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
CCM2-204ENST00000470837 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
CCM2-204ENST00000470837 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
CCM2-204ENST00000470837 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
CCM2-204ENST00000470837 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
CCM2-204ENST00000470837 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 MYL6BP14649 208 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 SIK1P57059 783 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 AAMPQ13685 434 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 COG6Q9Y2V7 657 aa12.37□□□□□ -0.43
CCM2-204ENST00000470837 SIPA1L3O60292 1781 aaPredicted RBP12.37□□□□□ -0.43
CCM2-204ENST00000470837 MVPQ14764 893 aaKnown RBP12.36□□□□□ -0.43
CCM2-204ENST00000470837 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
CCM2-204ENST00000470837 DOT1LQ8TEK3 1739 aa12.35□□□□□ -0.43
CCM2-204ENST00000470837 TOGARAM1Q9Y4F4 1720 aa12.35□□□□□ -0.43
CCM2-204ENST00000470837 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
CCM2-204ENST00000470837 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
CCM2-204ENST00000470837 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CCM2-204ENST00000470837 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
CCM2-204ENST00000470837 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
CCM2-204ENST00000470837 TRIM37O94972 964 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 ANXA1P04083 346 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 NEXNQ0ZGT2 675 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 G2E3Q7L622 706 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 PHAXQ9H814 394 aaKnown RBP12.34□□□□□ -0.43
CCM2-204ENST00000470837 ABCC4O15439 1325 aa12.34□□□□□ -0.43
CCM2-204ENST00000470837 VIRMAQ69YN4 1812 aaKnown RBP12.33□□□□□ -0.44
CCM2-204ENST00000470837 A1BGP04217 495 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 RLBP1P12271 317 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 ARXQ96QS3 562 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
CCM2-204ENST00000470837 RGS12O14924 1447 aa12.33□□□□□ -0.44
CCM2-204ENST00000470837 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
CCM2-204ENST00000470837 PDIA6Q15084 440 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 INTS3Q68E01 1043 aaKnown RBP12.32□□□□□ -0.44
CCM2-204ENST00000470837 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
CCM2-204ENST00000470837 F6X3S4 739 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
CCM2-204ENST00000470837 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 CCDC87Q9NVE4 849 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
CCM2-204ENST00000470837 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
CCM2-204ENST00000470837 SF3B2Q13435 895 aaKnown RBP12.3□□□□□ -0.44
CCM2-204ENST00000470837 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
CCM2-204ENST00000470837 HDAC5Q9UQL6 1122 aa12.3□□□□□ -0.44
CCM2-204ENST00000470837 ITGB4P16144 1822 aa12.3□□□□□ -0.44
CCM2-204ENST00000470837 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 A0A087WZG4 1122 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 APBA3O96018 575 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 IL6STP40189 918 aaPredicted RBP12.29□□□□□ -0.44
CCM2-204ENST00000470837 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CCM2-204ENST00000470837 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 PLBD2Q8NHP8 589 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 NHSQ6T4R5 1651 aa12.29□□□□□ -0.44
CCM2-204ENST00000470837 ALDH1L1O75891 902 aa12.28□□□□□ -0.44
CCM2-204ENST00000470837 GNAI3P08754 354 aa12.28□□□□□ -0.44
CCM2-204ENST00000470837 ITPK1Q13572 414 aa12.28□□□□□ -0.44
CCM2-204ENST00000470837 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
CCM2-204ENST00000470837 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.44
CCM2-204ENST00000470837 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
CCM2-204ENST00000470837 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
CCM2-204ENST00000470837 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
CCM2-204ENST00000470837 AK7Q96M32 723 aa12.27□□□□□ -0.45
CCM2-204ENST00000470837 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
CCM2-204ENST00000470837 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
CCM2-204ENST00000470837 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
CCM2-204ENST00000470837 C5P01031 1676 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 LAMB4A4D0S4 1761 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 ZBTB7BO15156 539 aaPredicted RBP12.26□□□□□ -0.45
CCM2-204ENST00000470837 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
CCM2-204ENST00000470837 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
CCM2-204ENST00000470837 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
CCM2-204ENST00000470837 DZIP3Q86Y13 1208 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms