RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SERPINA10Q9UK55 444 aa8.21□□□□□ -1.1
COL9A1-206ENST00000470652 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
COL9A1-206ENST00000470652 H7C1W4 665 aa8.2□□□□□ -1.1
COL9A1-206ENST00000470652 PPARGC1BQ86YN6 1023 aaKnown RBP8.2□□□□□ -1.1
COL9A1-206ENST00000470652 SIX5Q8N196 739 aa8.2□□□□□ -1.1
COL9A1-206ENST00000470652 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
COL9A1-206ENST00000470652 KIAA1024Q9UPX6 916 aa8.2□□□□□ -1.1
COL9A1-206ENST00000470652 DYRK1BQ9Y463 629 aa8.2□□□□□ -1.1
COL9A1-206ENST00000470652 A6NJY4 79 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 MTFR1Q15390 333 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 RHBDD1Q8TEB9 315 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 ACDQ96AP0 544 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
COL9A1-206ENST00000470652 M0R2N6 131 aa8.18□□□□□ -1.1
COL9A1-206ENST00000470652 RFX1P22670 979 aa8.18□□□□□ -1.1
COL9A1-206ENST00000470652 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
COL9A1-206ENST00000470652 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
COL9A1-206ENST00000470652 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
COL9A1-206ENST00000470652 MX2P20592 715 aa8.17□□□□□ -1.1
COL9A1-206ENST00000470652 PTK7Q13308 1070 aa8.17□□□□□ -1.1
COL9A1-206ENST00000470652 ADAM23O75077 832 aa8.16□□□□□ -1.1
COL9A1-206ENST00000470652 DKK1O94907 266 aa8.16□□□□□ -1.1
COL9A1-206ENST00000470652 SEC13P55735 322 aa8.16□□□□□ -1.1
COL9A1-206ENST00000470652 CRTC2Q53ET0 693 aaPredicted RBP8.16□□□□□ -1.1
COL9A1-206ENST00000470652 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
COL9A1-206ENST00000470652 NIFKQ9BYG3 293 aaKnown RBP8.16□□□□□ -1.1
COL9A1-206ENST00000470652 NSFL1CQ9UNZ2 370 aaKnown RBP8.16□□□□□ -1.1
COL9A1-206ENST00000470652 A0A1B0GTH6 734 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L10C9JJH3 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L13C9JLJ4 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L12C9JPN9 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L11C9JVI0 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L21D6R901 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L18D6R9N7 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L22D6RA61 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L17D6RBQ6 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L19D6RCP7 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L20D6RJB6 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 ITGB2P05107 769 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 PHKA2P46019 1235 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 USP17L24Q0WX57 530 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 GALNT6Q8NCL4 622 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
COL9A1-206ENST00000470652 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
COL9A1-206ENST00000470652 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
COL9A1-206ENST00000470652 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
COL9A1-206ENST00000470652 F11P03951 625 aa8.14□□□□□ -1.11
COL9A1-206ENST00000470652 EPHA4P54764 986 aa8.14□□□□□ -1.11
COL9A1-206ENST00000470652 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
COL9A1-206ENST00000470652 TNS4Q8IZW8 715 aa8.14□□□□□ -1.11
COL9A1-206ENST00000470652 DPYDQ12882 1025 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 XP32Q5T750 250 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
COL9A1-206ENST00000470652 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
COL9A1-206ENST00000470652 OIP5O43482 229 aa8.12□□□□□ -1.11
COL9A1-206ENST00000470652 PROCP04070 461 aa8.12□□□□□ -1.11
COL9A1-206ENST00000470652 PLA2G4AP47712 749 aa8.12□□□□□ -1.11
COL9A1-206ENST00000470652 SRPK2P78362 688 aaKnown RBP8.12□□□□□ -1.11
COL9A1-206ENST00000470652 TSEN2Q8NCE0 465 aaKnown RBP8.12□□□□□ -1.11
COL9A1-206ENST00000470652 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
COL9A1-206ENST00000470652 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.11□□□□□ -1.11
COL9A1-206ENST00000470652 SLC9A9Q8IVB4 645 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 ZNF295-AS1Q8N0V1 137 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 PBXIP1Q96AQ6 731 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 ARXQ96QS3 562 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 OXCT2Q9BYC2 517 aaPredicted RBP8.11□□□□□ -1.11
COL9A1-206ENST00000470652 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
COL9A1-206ENST00000470652 SNRPNP63162 240 aaKnown RBP8.1□□□□□ -1.11
COL9A1-206ENST00000470652 ELOAQ14241 798 aaKnown RBP8.1□□□□□ -1.11
COL9A1-206ENST00000470652 TEAD4Q15561 434 aa8.1□□□□□ -1.11
COL9A1-206ENST00000470652 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
COL9A1-206ENST00000470652 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
COL9A1-206ENST00000470652 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
COL9A1-206ENST00000470652 CSB-PGBD3P0DP91 1061 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 MSX1P28360 303 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 NOS2P35228 1153 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 MAP2K3P46734 347 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 LBRQ14739 615 aaKnown RBP8.09□□□□□ -1.11
COL9A1-206ENST00000470652 PGBD3Q8N328 593 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 GAS2L2Q8NHY3 880 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 TSPAN10Q9H1Z9 355 aaPredicted RBP8.09□□□□□ -1.11
COL9A1-206ENST00000470652 GPAMQ9HCL2 828 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 NOVA2Q9UNW9 492 aaKnown RBP8.09□□□□□ -1.11
COL9A1-206ENST00000470652 CHMP3Q9Y3E7 222 aa8.09□□□□□ -1.11
COL9A1-206ENST00000470652 ATG7O95352 703 aa8.08□□□□□ -1.12
COL9A1-206ENST00000470652 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
COL9A1-206ENST00000470652 TBCELQ5QJ74 424 aa8.08□□□□□ -1.12
COL9A1-206ENST00000470652 L3MBTL2Q969R5 705 aa8.08□□□□□ -1.12
COL9A1-206ENST00000470652 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
COL9A1-206ENST00000470652 RRAGCQ9HB90 399 aa8.08□□□□□ -1.12
COL9A1-206ENST00000470652 ZDHHC3Q9NYG2 299 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms