RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 NWD1Q149M9 1564 aa6.59□□□□□ -1.35
SF3B1-208ENST00000470268 ATP6V1AP38606 617 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 PUS10Q3MIT2 529 aaKnown RBP6.59□□□□□ -1.36
SF3B1-208ENST00000470268 RIC3Q7Z5B4 369 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 CYP4X1Q8N118 509 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 RDH13Q8NBN7 331 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 KIF7Q2M1P5 1343 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 KNDC1Q76NI1 1749 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 STRCP1A6NGW2 1772 aa6.59□□□□□ -1.36
SF3B1-208ENST00000470268 CHD2O14647 1828 aaKnown RBP6.58□□□□□ -1.36
SF3B1-208ENST00000470268 USP46P62068 366 aa6.58□□□□□ -1.36
SF3B1-208ENST00000470268 PPP2R2DQ66LE6 453 aa6.58□□□□□ -1.36
SF3B1-208ENST00000470268 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
SF3B1-208ENST00000470268 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
SF3B1-208ENST00000470268 TULP4Q9NRJ4 1543 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 KDM4AO75164 1064 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 GCGRP47871 477 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-208ENST00000470268 RSBN1LQ6PCB5 846 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-208ENST00000470268 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-208ENST00000470268 QRICH2Q9H0J4 1663 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 TMF1P82094 1093 aa6.57□□□□□ -1.36
SF3B1-208ENST00000470268 PROSER2Q86WR7 435 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-208ENST00000470268 NKTRP30414 1462 aaKnown RBP6.56□□□□□ -1.36
SF3B1-208ENST00000470268 MOXD2PA6NHM9 499 aa6.56□□□□□ -1.36
SF3B1-208ENST00000470268 AXIN1O15169 862 aa6.56□□□□□ -1.36
SF3B1-208ENST00000470268 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
SF3B1-208ENST00000470268 LRRC7Q96NW7 1537 aa6.56□□□□□ -1.36
SF3B1-208ENST00000470268 WASLO00401 505 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-208ENST00000470268 ZBTB24O43167 697 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-208ENST00000470268 GRIPAP1Q4V328 841 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 CDK19Q9BWU1 502 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 EVC2Q86UK5 1308 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 PRR36Q9H6K5 1346 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 MCM6Q14566 821 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 MSS51Q4VC12 460 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-208ENST00000470268 DIEXFQ68CQ4 756 aaKnown RBP6.55□□□□□ -1.36
SF3B1-208ENST00000470268 BANK1Q8NDB2 785 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 ADGRL3Q9HAR2 1447 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 LTBP4Q8N2S1 1624 aa6.55□□□□□ -1.36
SF3B1-208ENST00000470268 RFC5P40937 340 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
SF3B1-208ENST00000470268 FUT2Q10981 343 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
SF3B1-208ENST00000470268 TMEM259Q4ZIN3 620 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 BRICD5Q6PL45 260 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 FAM160A2Q8N612 972 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-208ENST00000470268 ADGRB2O60241 1585 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 NALCNQ8IZF0 1738 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 HOXA2O43364 376 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 PRPF38BQ5VTL8 546 aaKnown RBP6.54□□□□□ -1.36
SF3B1-208ENST00000470268 C19orf44Q9H6X5 657 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 SLC27A5Q9Y2P5 690 aa6.54□□□□□ -1.36
SF3B1-208ENST00000470268 ATP7BP35670 1465 aa6.53□□□□□ -1.36
SF3B1-208ENST00000470268 LILRB3O75022 631 aa6.53□□□□□ -1.36
SF3B1-208ENST00000470268 NDUFV2P19404 249 aa6.53□□□□□ -1.36
SF3B1-208ENST00000470268 SLC12A5Q9H2X9 1139 aa6.53□□□□□ -1.36
SF3B1-208ENST00000470268 NCOA3Q9Y6Q9 1424 aa6.53□□□□□ -1.36
SF3B1-208ENST00000470268 TTC24A2A3L6 582 aaPredicted RBP6.52□□□□□ -1.37
SF3B1-208ENST00000470268 SPDYE5A6NIY4 337 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 A6NJR5 290 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 WFS1O76024 890 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 Q3C1V9 767 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
SF3B1-208ENST00000470268 PUS7Q96PZ0 661 aaKnown RBP6.52□□□□□ -1.37
SF3B1-208ENST00000470268 CDC42BPGQ6DT37 1551 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 WNT7AO00755 349 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 CABP1Q9NZU7 370 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 USP32Q8NFA0 1604 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 ATAD2Q6PL18 1390 aa6.52□□□□□ -1.37
SF3B1-208ENST00000470268 XIRP1Q702N8 1843 aaKnown RBP6.51□□□□□ -1.37
SF3B1-208ENST00000470268 PER1O15534 1290 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-208ENST00000470268 QPCTQ16769 361 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 SNIP1Q8TAD8 396 aaKnown RBP6.51□□□□□ -1.37
SF3B1-208ENST00000470268 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 PANK3Q9H999 370 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 GMPR2Q9P2T1 348 aaKnown RBP6.51□□□□□ -1.37
SF3B1-208ENST00000470268 CD163L1Q9NR16 1453 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 MYOM1P52179 1685 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 MST1RQ04912 1400 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 PPIP5K1Q6PFW1 1433 aa6.51□□□□□ -1.37
SF3B1-208ENST00000470268 SOCS7O14512 581 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 FDX1P10109 184 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 ORAI2Q96SN7 254 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 CARD14Q9BXL6 1004 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 MSH6P52701 1360 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 DCCP43146 1447 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 PMFBP1Q8TBY8 1022 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 ZBTB3Q9H5J0 574 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 STK17AQ9UEE5 414 aa6.5□□□□□ -1.37
SF3B1-208ENST00000470268 DACH1Q9UI36 760 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms