RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 ZSCAN23Q3MJ62 389 aa20.59■□□□□ 0.89
PGAP1-208ENST00000470179 GDPD2Q9HCC8 539 aa20.59■□□□□ 0.89
PGAP1-208ENST00000470179 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
PGAP1-208ENST00000470179 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
PGAP1-208ENST00000470179 TSC1Q92574 1164 aa20.58■□□□□ 0.89
PGAP1-208ENST00000470179 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
PGAP1-208ENST00000470179 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.88
PGAP1-208ENST00000470179 SYCE3A1L190 88 aa20.58■□□□□ 0.88
PGAP1-208ENST00000470179 RRP9O43818 475 aaKnown RBP20.58■□□□□ 0.88
PGAP1-208ENST00000470179 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.88
PGAP1-208ENST00000470179 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
PGAP1-208ENST00000470179 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
PGAP1-208ENST00000470179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■■■□ 21
PGAP1-208ENST00000470179 WNK3Q9BYP7 1800 aa20.57■□□□□ 0.88
PGAP1-208ENST00000470179 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
PGAP1-208ENST00000470179 TOM1L2Q6ZVM7 507 aa20.57■□□□□ 0.88
PGAP1-208ENST00000470179 LARP6Q9BRS8 491 aaKnown RBP20.56■□□□□ 0.88
PGAP1-208ENST00000470179 LMBRD1Q9NUN5 540 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 FAM177BA6PVY3 158 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 GLIPR1L2Q4G1C9 344 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
PGAP1-208ENST00000470179 THRAP3Q9Y2W1 955 aaKnown RBP20.56■□□□□ 0.88
PGAP1-208ENST00000470179 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
PGAP1-208ENST00000470179 OVOS2A0A0G2JMS6 1433 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 MEGF6O75095 1541 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 CDC45O75419 566 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 CALD1Q05682 793 aaKnown RBP20.55■□□□□ 0.88
PGAP1-208ENST00000470179 AMOTQ4VCS5 1084 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 C8orf37Q96NL8 207 aa20.55■□□□□ 0.88
PGAP1-208ENST00000470179 VPS72Q15906 364 aa20.54■□□□□ 0.88
PGAP1-208ENST00000470179 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.54■□□□□ 0.88
PGAP1-208ENST00000470179 SPATA31A5Q5VU36 1347 aa20.54■□□□□ 0.88
PGAP1-208ENST00000470179 SPATA31A7Q8IWB4 1347 aa20.54■□□□□ 0.88
PGAP1-208ENST00000470179 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 SDSP20132 328 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 KLHL40Q2TBA0 621 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 ZSCAN30Q86W11 494 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 TMEM63CQ9P1W3 806 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 GOLGA6L22H0YM25 854 aa20.53■□□□□ 0.88
PGAP1-208ENST00000470179 ZNF830Q96NB3 372 aaPredicted RBP20.53■□□□□ 0.88
PGAP1-208ENST00000470179 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
PGAP1-208ENST00000470179 F6X3S4 739 aa20.52■□□□□ 0.88
PGAP1-208ENST00000470179 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
PGAP1-208ENST00000470179 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.88
PGAP1-208ENST00000470179 MCM10Q7L590 875 aa20.52■□□□□ 0.88
PGAP1-208ENST00000470179 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
PGAP1-208ENST00000470179 CIZ1Q9ULV3 898 aaPredicted RBP20.52■□□□□ 0.88
PGAP1-208ENST00000470179 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.87
PGAP1-208ENST00000470179 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.87
PGAP1-208ENST00000470179 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.87
PGAP1-208ENST00000470179 SLC4A10Q6U841 1118 aa20.52■□□□□ 0.87
PGAP1-208ENST00000470179 NECTIN2Q92692 538 aa20.52■□□□□ 0.87
PGAP1-208ENST00000470179 MEIS3Q99687 375 aa20.52■□□□□ 0.87
PGAP1-208ENST00000470179 MEX3CQ5U5Q3 659 aaKnown RBP20.51■□□□□ 0.87
PGAP1-208ENST00000470179 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
PGAP1-208ENST00000470179 CCDC173Q0VFZ6 552 aa20.51■□□□□ 0.87
PGAP1-208ENST00000470179 SKOR2Q2VWA4 1001 aaPredicted RBP20.51■□□□□ 0.87
PGAP1-208ENST00000470179 C17orf53Q8N3J3 647 aaPredicted RBP20.51■□□□□ 0.87
PGAP1-208ENST00000470179 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
PGAP1-208ENST00000470179 ATRNO75882 1429 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 PRDM10Q9NQV6 1147 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 ADAMTS7Q9UKP4 1686 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 IL2RBP14784 551 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 ANP32BQ92688 251 aaKnown RBP20.5■□□□□ 0.87
PGAP1-208ENST00000470179 USP21Q9UK80 565 aa20.5■□□□□ 0.87
PGAP1-208ENST00000470179 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
PGAP1-208ENST00000470179 AFF2P51816 1311 aa20.49■□□□□ 0.87
PGAP1-208ENST00000470179 SHANK3Q9BYB0 1731 aa20.49■□□□□ 0.87
PGAP1-208ENST00000470179 TTC22Q5TAA0 569 aa20.48■□□□□ 0.87
PGAP1-208ENST00000470179 PPP1R9BQ96SB3 815 aa20.48■□□□□ 0.87
PGAP1-208ENST00000470179 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
PGAP1-208ENST00000470179 UPF3BQ9BZI7 483 aaKnown RBP20.47■□□□□ 0.87
PGAP1-208ENST00000470179 LRRC37A3O60309 1634 aa20.47■□□□□ 0.87
PGAP1-208ENST00000470179 EXOC6BQ9Y2D4 811 aa20.47■□□□□ 0.87
PGAP1-208ENST00000470179 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
PGAP1-208ENST00000470179 IL16Q14005 1332 aa20.46■□□□□ 0.87
PGAP1-208ENST00000470179 NEK4P51957 841 aa20.46■□□□□ 0.87
PGAP1-208ENST00000470179 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
PGAP1-208ENST00000470179 AKAP4Q5JQC9 854 aa20.46■□□□□ 0.87
PGAP1-208ENST00000470179 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 GLI3P10071 1580 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 THSD7AQ9UPZ6 1657 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 OFD1O75665 1012 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 MAP4K4O95819 1239 aaPredicted RBP20.44■□□□□ 0.86
PGAP1-208ENST00000470179 ABCC4O15439 1325 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 UQCRHLA0A096LP55 91 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 UQCRHP07919 91 aa20.44■□□□□ 0.86
PGAP1-208ENST00000470179 TRPC5Q9UL62 973 aaPredicted RBP20.44■□□□□ 0.86
PGAP1-208ENST00000470179 GADD45BO75293 160 aaPredicted RBP20.43■□□□□ 0.86
PGAP1-208ENST00000470179 G2E3Q7L622 706 aa20.43■□□□□ 0.86
PGAP1-208ENST00000470179 ZCRB1Q8TBF4 217 aaKnown RBP20.43■□□□□ 0.86
PGAP1-208ENST00000470179 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
PGAP1-208ENST00000470179 CEMIPQ8WUJ3 1361 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms