RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
USP30-205ENST00000470117 FCHSD2O94868 740 aa12.56□□□□□ -0.4
USP30-205ENST00000470117 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
USP30-205ENST00000470117 NUDCQ9Y266 331 aa12.56□□□□□ -0.4
USP30-205ENST00000470117 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
USP30-205ENST00000470117 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
USP30-205ENST00000470117 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
USP30-205ENST00000470117 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
USP30-205ENST00000470117 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
USP30-205ENST00000470117 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 IL17REQ8NFR9 667 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
USP30-205ENST00000470117 HEG1Q9ULI3 1381 aa12.54□□□□□ -0.4
USP30-205ENST00000470117 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
USP30-205ENST00000470117 STARD3NLO95772 234 aa12.53□□□□□ -0.4
USP30-205ENST00000470117 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
USP30-205ENST00000470117 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP30-205ENST00000470117 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
USP30-205ENST00000470117 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
USP30-205ENST00000470117 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
USP30-205ENST00000470117 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
USP30-205ENST00000470117 CHRNA5P30532 468 aa12.52□□□□□ -0.41
USP30-205ENST00000470117 NFIXQ14938 502 aa12.52□□□□□ -0.41
USP30-205ENST00000470117 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
USP30-205ENST00000470117 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
USP30-205ENST00000470117 AFDNP55196 1824 aaKnown RBP12.52□□□□□ -0.41
USP30-205ENST00000470117 CEMIPQ8WUJ3 1361 aa12.52□□□□□ -0.41
USP30-205ENST00000470117 A0A087WZG4 1122 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 TM4SF1P30408 202 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
USP30-205ENST00000470117 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
USP30-205ENST00000470117 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
USP30-205ENST00000470117 KCNA3P22001 575 aa12.5□□□□□ -0.41
USP30-205ENST00000470117 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
USP30-205ENST00000470117 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
USP30-205ENST00000470117 SERPINB2P05120 415 aa12.49□□□□□ -0.41
USP30-205ENST00000470117 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
USP30-205ENST00000470117 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 KCNQ3O43525 872 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 NEFMP07197 916 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 MCM10Q7L590 875 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
USP30-205ENST00000470117 KIF3CO14782 793 aa12.47□□□□□ -0.41
USP30-205ENST00000470117 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
USP30-205ENST00000470117 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
USP30-205ENST00000470117 BCORQ6W2J9 1755 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 NPHP1O15259 732 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 A1BGP04217 495 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 DCTN1Q14203 1278 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
USP30-205ENST00000470117 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
USP30-205ENST00000470117 RASSF7Q02833 373 aa12.45□□□□□ -0.42
USP30-205ENST00000470117 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
USP30-205ENST00000470117 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
USP30-205ENST00000470117 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
USP30-205ENST00000470117 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
USP30-205ENST00000470117 H0YIN7 160 aa12.44□□□□□ -0.42
USP30-205ENST00000470117 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
USP30-205ENST00000470117 HSPA6P17066 643 aa12.44□□□□□ -0.42
USP30-205ENST00000470117 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
USP30-205ENST00000470117 KDM2BQ8NHM5 1336 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
USP30-205ENST00000470117 CAMTA2O94983 1202 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
USP30-205ENST00000470117 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 PDE6BP35913 854 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 ST5P78524 1137 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
USP30-205ENST00000470117 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP30-205ENST00000470117 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 SBF1O95248 1867 aa12.42□□□□□ -0.42
USP30-205ENST00000470117 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
USP30-205ENST00000470117 TOMM70O94826 608 aa12.41□□□□□ -0.42
USP30-205ENST00000470117 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
USP30-205ENST00000470117 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
USP30-205ENST00000470117 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
USP30-205ENST00000470117 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
USP30-205ENST00000470117 LMNB1P20700 586 aa12.4□□□□□ -0.42
USP30-205ENST00000470117 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
USP30-205ENST00000470117 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
USP30-205ENST00000470117 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
USP30-205ENST00000470117 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
USP30-205ENST00000470117 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms