RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 DDX21Q9NR30 783 aaKnown RBP eCLIP8.51□□□□□ -1.053e-6■□□□□ 8.6
GAPVD1-215ENST00000470056 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 TNNT3P45378 269 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 ZNF790Q6PG37 636 aa8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 CARD10Q9BWT7 1032 aa8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 PXDNQ92626 1479 aa8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 ERVV-2B6SEH9 535 aa8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 MED1Q15648 1581 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-215ENST00000470056 ERC2O15083 957 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 TTC22Q5TAA0 569 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 LINS1Q8NG48 757 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 LRRFIP2Q9Y608 721 aaKnown RBP8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 AOX1Q06278 1338 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 LRRC37A3O60309 1634 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 CHMP4CQ96CF2 233 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 RGS12O14924 1447 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 ATP10DQ9P241 1426 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 KIF1BPQ96EK5 621 aa8.49□□□□□ -1.05
GAPVD1-215ENST00000470056 KDM4FA0A1W2PPD8 638 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 SURF6O75683 361 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 DDX17Q92841 729 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 CCDC34Q96HJ3 373 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 LTN1O94822 1766 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 SRGAP3O43295 1099 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 MX1P20591 662 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 G3BP1Q13283 466 aaKnown RBP eCLIP8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 MAP3K2Q9Y2U5 619 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 ATP6V1DQ9Y5K8 247 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 TRPM3Q9HCF6 1732 aaPredicted RBP8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 TPM2P07951 284 aa8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 CLASRPQ8N2M8 674 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-215ENST00000470056 PHAXQ9H814 394 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 TMOD3Q9NYL9 352 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 RABEP1Q15276 862 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 BEND3Q5T5X7 828 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 DLG5Q8TDM6 1919 aa8.47□□□□□ -1.05
GAPVD1-215ENST00000470056 IFIT2P09913 472 aaKnown RBP8.46□□□□□ -1.05
GAPVD1-215ENST00000470056 ST18O60284 1047 aa8.46□□□□□ -1.05
GAPVD1-215ENST00000470056 SIRT2Q8IXJ6 389 aa8.46□□□□□ -1.05
GAPVD1-215ENST00000470056 FAM208AQ9UK61 1670 aaKnown RBP8.46□□□□□ -1.05
GAPVD1-215ENST00000470056 RUFY2Q8WXA3 655 aa8.46□□□□□ -1.05
GAPVD1-215ENST00000470056 PPP1R42Q7Z4L9 355 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 SSH3Q8TE77 659 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 EXOC6BQ9Y2D4 811 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 GOLGA6L1Q8N7Z2 621 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
GAPVD1-215ENST00000470056 TPM4P67936 248 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 OSBPL3Q9H4L5 887 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 CNTROBQ8N137 903 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 ALS2Q96Q42 1657 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 HIP1O00291 1037 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 RBM25P49756 843 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 IBTKQ9P2D0 1353 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 TBC1D9Q6ZT07 1266 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 GRM8O00222 908 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 TOM1O60784 492 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 PDE1AP54750 535 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 LMO7Q8WWI1 1683 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 STARD3NLO95772 234 aa8.45□□□□□ -1.06
GAPVD1-215ENST00000470056 EPB41L2O43491 1005 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 KCNQ3O43525 872 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 MYL6BP14649 208 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 TTC41PQ6P2S7 1318 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 KIF6Q6ZMV9 814 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 ZNF496Q96IT1 587 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 METTL22Q9BUU2 404 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 GPS2Q13227 327 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 SLC39A6Q13433 755 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 MTX1Q13505 466 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 XAGE3Q8WTP9 111 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 MEGF6O75095 1541 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 MARF1Q9Y4F3 1742 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 CYP27B1O15528 508 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 TPM3P06753 285 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 HMGN5P82970 282 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 EXOC5O00471 708 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 GLRX3O76003 335 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 TAF3Q5VWG9 929 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 CAMTA1Q9Y6Y1 1673 aa8.44□□□□□ -1.06
GAPVD1-215ENST00000470056 HEG1Q9ULI3 1381 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 SNX21Q969T3 373 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 RILPL2Q969X0 211 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms