RNA–Protein interactions for RNA: ENST00000469241.2

PKD1-205, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 659 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-205ENST00000469241 STARD3NLO95772 234 aa27.69■■■□□ 2.02
PKD1-205ENST00000469241 PRKAR2BP31323 418 aa27.69■■■□□ 2.02
PKD1-205ENST00000469241 ARHGAP27Q6ZUM4 889 aa27.69■■■□□ 2.02
PKD1-205ENST00000469241 IL17REQ8NFR9 667 aa27.69■■■□□ 2.02
PKD1-205ENST00000469241 NARFQ9UHQ1 456 aa27.69■■■□□ 2.02
PKD1-205ENST00000469241 CANXP27824 592 aaKnown RBP27.68■■■□□ 2.02
PKD1-205ENST00000469241 PIM2Q9P1W9 311 aa27.68■■■□□ 2.02
PKD1-205ENST00000469241 BRCA1P38398 1863 aaKnown RBP27.68■■■□□ 2.02
PKD1-205ENST00000469241 POLRMTO00411 1230 aaKnown RBP27.67■■■□□ 2.02
PKD1-205ENST00000469241 TM4SF1P30408 202 aa27.67■■■□□ 2.02
PKD1-205ENST00000469241 PPP2R1AP30153 589 aa27.66■■■□□ 2.02
PKD1-205ENST00000469241 ZNF790Q6PG37 636 aa27.66■■■□□ 2.02
PKD1-205ENST00000469241 RSPH6AQ9H0K4 717 aa27.65■■■□□ 2.02
PKD1-205ENST00000469241 SIPA1L3O60292 1781 aaPredicted RBP27.65■■■□□ 2.02
PKD1-205ENST00000469241 U2AF1L5P0DN76 240 aaPredicted RBP27.64■■■□□ 2.02
PKD1-205ENST00000469241 KCNA3P22001 575 aa27.64■■■□□ 2.02
PKD1-205ENST00000469241 U2AF1Q01081 240 aaKnown RBP eCLIP27.64■■■□□ 2.02
PKD1-205ENST00000469241 ZNF496Q96IT1 587 aaPredicted RBP27.64■■■□□ 2.02
PKD1-205ENST00000469241 PHACTR3Q96KR7 559 aa27.64■■■□□ 2.02
PKD1-205ENST00000469241 TEX13AQ9BXU3 409 aaPredicted RBP27.64■■■□□ 2.02
PKD1-205ENST00000469241 HEG1Q9ULI3 1381 aa27.63■■■□□ 2.01
PKD1-205ENST00000469241 DALRD3Q5D0E6 543 aaKnown RBP27.63■■■□□ 2.01
PKD1-205ENST00000469241 ARFGEF1Q9Y6D6 1849 aa27.62■■■□□ 2.01
PKD1-205ENST00000469241 A0A087WZG4 1122 aa27.62■■■□□ 2.01
PKD1-205ENST00000469241 NFIXQ14938 502 aa27.62■■■□□ 2.01
PKD1-205ENST00000469241 FMNL2Q96PY5 1086 aa27.62■■■□□ 2.01
PKD1-205ENST00000469241 CEMIPQ8WUJ3 1361 aa27.61■■■□□ 2.01
PKD1-205ENST00000469241 CHRNA5P30532 468 aa27.61■■■□□ 2.01
PKD1-205ENST00000469241 BTBD11A6QL63 1104 aa27.6■■■□□ 2.01
PKD1-205ENST00000469241 NPM2Q86SE8 214 aaKnown RBP27.6■■■□□ 2.01
PKD1-205ENST00000469241 RTF1Q92541 710 aaKnown RBP27.6■■■□□ 2.01
PKD1-205ENST00000469241 ZNF330Q9Y3S2 320 aaPredicted RBP27.6■■■□□ 2.01
PKD1-205ENST00000469241 EIF5P55010 431 aaKnown RBP27.59■■■□□ 2.01
PKD1-205ENST00000469241 BCL2L12Q9HB09 334 aa27.59■■■□□ 2.01
PKD1-205ENST00000469241 AFDNP55196 1824 aaKnown RBP27.59■■■□□ 2.01
PKD1-205ENST00000469241 SERPINB2P05120 415 aa27.57■■■□□ 2
PKD1-205ENST00000469241 NRXN2Q9P2S2 1712 aa27.56■■■□□ 2
PKD1-205ENST00000469241 BICDL1Q6ZP65 573 aa27.56■■■□□ 2
PKD1-205ENST00000469241 IL6STP40189 918 aaPredicted RBP27.54■■■□□ 2
PKD1-205ENST00000469241 C9orf131Q5VYM1 1079 aa27.54■■■□□ 2
PKD1-205ENST00000469241 SCN7AQ01118 1682 aa27.52■■■□□ 2
PKD1-205ENST00000469241 KIF3CO14782 793 aa27.52■■■□□ 2
PKD1-205ENST00000469241 KCNQ3O43525 872 aa27.52■■■□□ 2
PKD1-205ENST00000469241 NEFMP07197 916 aa27.52■■■□□ 2
PKD1-205ENST00000469241 MCM10Q7L590 875 aa27.52■■■□□ 2
PKD1-205ENST00000469241 TBC1D2BQ9UPU7 963 aa27.52■■■□□ 2
PKD1-205ENST00000469241 A1BGP04217 495 aa27.51■■□□□ 1.99
PKD1-205ENST00000469241 TBC1D9BQ66K14 1250 aa27.5■■□□□ 1.99
PKD1-205ENST00000469241 RNF181Q9P0P0 153 aa27.5■■□□□ 1.99
PKD1-205ENST00000469241 C2CD5Q86YS7 1000 aa27.49■■□□□ 1.99
PKD1-205ENST00000469241 DLEC1Q9Y238 1755 aa27.48■■□□□ 1.99
PKD1-205ENST00000469241 H0YIN7 160 aa27.48■■□□□ 1.99
PKD1-205ENST00000469241 HTATSF1O43719 755 aaKnown RBP27.48■■□□□ 1.99
PKD1-205ENST00000469241 HSPA6P17066 643 aa27.48■■□□□ 1.99
PKD1-205ENST00000469241 CARMIL3Q8ND23 1372 aa27.48■■□□□ 1.99
PKD1-205ENST00000469241 DCTN1Q14203 1278 aa27.47■■□□□ 1.99
PKD1-205ENST00000469241 NPHP1O15259 732 aa27.46■■□□□ 1.99
PKD1-205ENST00000469241 SNRPA1P09661 255 aaKnown RBP27.46■■□□□ 1.99
PKD1-205ENST00000469241 TTLL6Q8N841 843 aa27.46■■□□□ 1.99
PKD1-205ENST00000469241 USP16Q9Y5T5 823 aa27.46■■□□□ 1.99
PKD1-205ENST00000469241 DZIP3Q86Y13 1208 aaKnown RBP27.45■■□□□ 1.98
PKD1-205ENST00000469241 SETDB2Q96T68 719 aa27.44■■□□□ 1.98
PKD1-205ENST00000469241 NMRK2Q9NPI5 230 aa27.44■■□□□ 1.98
PKD1-205ENST00000469241 KDM2BQ8NHM5 1336 aa27.43■■□□□ 1.98
PKD1-205ENST00000469241 TOMM70O94826 608 aa27.43■■□□□ 1.98
PKD1-205ENST00000469241 PDE6BP35913 854 aa27.43■■□□□ 1.98
PKD1-205ENST00000469241 PDZRN3Q9UPQ7 1066 aa27.43■■□□□ 1.98
PKD1-205ENST00000469241 PRAMEF22A3QJZ6 481 aa27.42■■□□□ 1.98
PKD1-205ENST00000469241 CAMTA2O94983 1202 aa27.42■■□□□ 1.98
PKD1-205ENST00000469241 PIP4K2AP48426 406 aaPredicted RBP27.42■■□□□ 1.98
PKD1-205ENST00000469241 PRR5LQ6MZQ0 368 aa27.42■■□□□ 1.98
PKD1-205ENST00000469241 BCORQ6W2J9 1755 aa27.42■■□□□ 1.98
PKD1-205ENST00000469241 SBF1O95248 1867 aa27.41■■□□□ 1.98
PKD1-205ENST00000469241 RASSF7Q02833 373 aa27.41■■□□□ 1.98
PKD1-205ENST00000469241 TAF7Q15545 349 aaPredicted RBP27.41■■□□□ 1.98
PKD1-205ENST00000469241 C16orf71Q8IYS4 520 aaPredicted RBP27.41■■□□□ 1.98
PKD1-205ENST00000469241 BRIP1Q9BX63 1249 aa27.41■■□□□ 1.98
PKD1-205ENST00000469241 CNBD1Q8NA66 436 aa27.4■■□□□ 1.98
PKD1-205ENST00000469241 ZNF622Q969S3 477 aaKnown RBP eCLIP27.4■■□□□ 1.98
PKD1-205ENST00000469241 ANKRD31Q8N7Z5 1873 aa27.4■■□□□ 1.98
PKD1-205ENST00000469241 ST5P78524 1137 aa27.39■■□□□ 1.98
PKD1-205ENST00000469241 CCDC24Q8N4L8 307 aa27.39■■□□□ 1.98
PKD1-205ENST00000469241 ZNF652Q9Y2D9 606 aa27.39■■□□□ 1.98
PKD1-205ENST00000469241 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
PKD1-205ENST00000469241 LMNB1P20700 586 aa27.37■■□□□ 1.97
PKD1-205ENST00000469241 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
PKD1-205ENST00000469241 MAPK8IP3Q9UPT6 1336 aa27.37■■□□□ 1.97
PKD1-205ENST00000469241 CLEC4GQ6UXB4 293 aa27.36■■□□□ 1.97
PKD1-205ENST00000469241 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
PKD1-205ENST00000469241 MIS18AQ9NYP9 233 aa27.36■■□□□ 1.97
PKD1-205ENST00000469241 ZC3H4Q9UPT8 1303 aaKnown RBP27.36■■□□□ 1.97
PKD1-205ENST00000469241 COL11A2P13942 1736 aaPredicted RBP27.35■■□□□ 1.97
PKD1-205ENST00000469241 TNRC6CQ9HCJ0 1690 aaKnown RBP27.34■■□□□ 1.97
PKD1-205ENST00000469241 LAMB4A4D0S4 1761 aa27.33■■□□□ 1.97
PKD1-205ENST00000469241 NFE2L2Q16236 605 aa27.33■■□□□ 1.97
PKD1-205ENST00000469241 NBPF5PQ86XG9 351 aaPredicted RBP27.33■■□□□ 1.97
PKD1-205ENST00000469241 RBM46Q8TBY0 533 aaKnown RBP27.33■■□□□ 1.97
PKD1-205ENST00000469241 PLEKHF1Q96S99 279 aa27.33■■□□□ 1.97
PKD1-205ENST00000469241 ZNF219Q9P2Y4 722 aaPredicted RBP27.33■■□□□ 1.97
PKD1-205ENST00000469241 CEP350Q5VT06 3117 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms