RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 SBF1O95248 1867 aa19.77■□□□□ 0.76
SNED1-209ENST00000469006 AFDNP55196 1824 aaKnown RBP19.77■□□□□ 0.76
SNED1-209ENST00000469006 CYP19A1P11511 503 aaPredicted RBP19.77■□□□□ 0.76
SNED1-209ENST00000469006 HTRA3P83110 453 aa19.77■□□□□ 0.76
SNED1-209ENST00000469006 FSTL1Q12841 308 aa19.77■□□□□ 0.76
SNED1-209ENST00000469006 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
SNED1-209ENST00000469006 NRXN2Q9P2S2 1712 aa19.76■□□□□ 0.75
SNED1-209ENST00000469006 VIRMAQ69YN4 1812 aaKnown RBP19.76■□□□□ 0.75
SNED1-209ENST00000469006 RNMTO43148 476 aaKnown RBP19.76■□□□□ 0.75
SNED1-209ENST00000469006 RASSF7Q02833 373 aa19.76■□□□□ 0.75
SNED1-209ENST00000469006 NFIXQ14938 502 aa19.76■□□□□ 0.75
SNED1-209ENST00000469006 RRAGCQ9HB90 399 aa19.76■□□□□ 0.75
SNED1-209ENST00000469006 NARFQ9UHQ1 456 aa19.76■□□□□ 0.75
SNED1-209ENST00000469006 HMOX1P09601 288 aa19.75■□□□□ 0.75
SNED1-209ENST00000469006 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
SNED1-209ENST00000469006 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
SNED1-209ENST00000469006 DLEC1Q9Y238 1755 aa19.75■□□□□ 0.75
SNED1-209ENST00000469006 KLRG1Q96E93 195 aa19.74■□□□□ 0.75
SNED1-209ENST00000469006 BCL2L12Q9HB09 334 aa19.73■□□□□ 0.75
SNED1-209ENST00000469006 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
SNED1-209ENST00000469006 ZC3H4Q9UPT8 1303 aaKnown RBP19.72■□□□□ 0.75
SNED1-209ENST00000469006 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
SNED1-209ENST00000469006 SERPINB2P05120 415 aa19.71■□□□□ 0.75
SNED1-209ENST00000469006 MTHFSDQ2M296 383 aaKnown RBP19.71■□□□□ 0.75
SNED1-209ENST00000469006 TIAM2Q8IVF5 1701 aa19.71■□□□□ 0.75
SNED1-209ENST00000469006 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
SNED1-209ENST00000469006 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
SNED1-209ENST00000469006 LMNB1P20700 586 aa19.69■□□□□ 0.74
SNED1-209ENST00000469006 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
SNED1-209ENST00000469006 PRELPP51888 382 aa19.69■□□□□ 0.74
SNED1-209ENST00000469006 C2CD5Q86YS7 1000 aa19.69■□□□□ 0.74
SNED1-209ENST00000469006 JMYQ8N9B5 988 aa19.69■□□□□ 0.74
SNED1-209ENST00000469006 TTLL6Q8N841 843 aa19.68■□□□□ 0.74
SNED1-209ENST00000469006 KIF7Q2M1P5 1343 aa19.68■□□□□ 0.74
SNED1-209ENST00000469006 DIAPH1O60610 1272 aaKnown RBP19.67■□□□□ 0.74
SNED1-209ENST00000469006 BICDL1Q6ZP65 573 aa19.67■□□□□ 0.74
SNED1-209ENST00000469006 TTC5Q8N0Z6 440 aa19.67■□□□□ 0.74
SNED1-209ENST00000469006 SCN7AQ01118 1682 aa19.67■□□□□ 0.74
SNED1-209ENST00000469006 H0YIN7 160 aa19.66■□□□□ 0.74
SNED1-209ENST00000469006 GLTPD2A6NH11 291 aa19.65■□□□□ 0.74
SNED1-209ENST00000469006 NFKBIEO00221 500 aa19.65■□□□□ 0.74
SNED1-209ENST00000469006 STARD3NLO95772 234 aa19.65■□□□□ 0.74
SNED1-209ENST00000469006 ANKRD31Q8N7Z5 1873 aa19.65■□□□□ 0.74
SNED1-209ENST00000469006 A0A087WZG4 1122 aa19.64■□□□□ 0.73
SNED1-209ENST00000469006 VEGFAP15692 232 aaPredicted RBP19.64■□□□□ 0.73
SNED1-209ENST00000469006 EIF5P55010 431 aaKnown RBP19.64■□□□□ 0.73
SNED1-209ENST00000469006 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
SNED1-209ENST00000469006 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.73
SNED1-209ENST00000469006 COL11A2P13942 1736 aaPredicted RBP19.64■□□□□ 0.73
SNED1-209ENST00000469006 CCDC88AQ3V6T2 1871 aa19.63■□□□□ 0.73
SNED1-209ENST00000469006 COL13A1Q5TAT6 717 aaPredicted RBP19.63■□□□□ 0.73
SNED1-209ENST00000469006 TBC1D9BQ66K14 1250 aa19.63■□□□□ 0.73
SNED1-209ENST00000469006 HEG1Q9ULI3 1381 aa19.62■□□□□ 0.73
SNED1-209ENST00000469006 ZNF496Q96IT1 587 aaPredicted RBP19.62■□□□□ 0.73
SNED1-209ENST00000469006 ZNF330Q9Y3S2 320 aaPredicted RBP19.62■□□□□ 0.73
SNED1-209ENST00000469006 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
SNED1-209ENST00000469006 TEFQ10587 303 aa19.61■□□□□ 0.73
SNED1-209ENST00000469006 ZNF622Q969S3 477 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNED1-209ENST00000469006 PER1O15534 1290 aaPredicted RBP19.6■□□□□ 0.73
SNED1-209ENST00000469006 PRR5LQ6MZQ0 368 aa19.6■□□□□ 0.73
SNED1-209ENST00000469006 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
SNED1-209ENST00000469006 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
SNED1-209ENST00000469006 PCNTO95613 3336 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 U2SURPO15042 1029 aaKnown RBP19.59■□□□□ 0.73
SNED1-209ENST00000469006 PDE6BP35913 854 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 IL17REQ8NFR9 667 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 BRIP1Q9BX63 1249 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
SNED1-209ENST00000469006 C21orf2O43822 256 aa19.58■□□□□ 0.72
SNED1-209ENST00000469006 TEX13AQ9BXU3 409 aaPredicted RBP19.58■□□□□ 0.72
SNED1-209ENST00000469006 FER1L6Q2WGJ9 1857 aa19.58■□□□□ 0.72
SNED1-209ENST00000469006 POTECB2RU33 542 aa19.57■□□□□ 0.72
SNED1-209ENST00000469006 IL6STP40189 918 aaPredicted RBP19.57■□□□□ 0.72
SNED1-209ENST00000469006 DPY19L2Q6NUT2 758 aa19.56■□□□□ 0.72
SNED1-209ENST00000469006 FMNL2Q96PY5 1086 aa19.56■□□□□ 0.72
SNED1-209ENST00000469006 BCORQ6W2J9 1755 aa19.56■□□□□ 0.72
SNED1-209ENST00000469006 DICER1Q9UPY3 1922 aaKnown RBP19.56■□□□□ 0.72
SNED1-209ENST00000469006 A1BGP04217 495 aa19.55■□□□□ 0.72
SNED1-209ENST00000469006 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
SNED1-209ENST00000469006 ERFEQ4G0M1 354 aa19.55■□□□□ 0.72
SNED1-209ENST00000469006 TNS4Q8IZW8 715 aa19.55■□□□□ 0.72
SNED1-209ENST00000469006 CNBD1Q8NA66 436 aa19.55■□□□□ 0.72
SNED1-209ENST00000469006 LTBP3Q9NS15 1303 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 NPHP1O15259 732 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 CAPN15O75808 1086 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 CAMTA2O94983 1202 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
SNED1-209ENST00000469006 SETDB2Q96T68 719 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 TAOK3Q9H2K8 898 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 CEMIPQ8WUJ3 1361 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
SNED1-209ENST00000469006 HSPA1AP0DMV8 641 aaKnown RBP19.53■□□□□ 0.72
SNED1-209ENST00000469006 HSPA1BP0DMV9 641 aaKnown RBP19.53■□□□□ 0.72
SNED1-209ENST00000469006 ARFGEF2Q9Y6D5 1785 aa19.52■□□□□ 0.72
SNED1-209ENST00000469006 KCNQ3O43525 872 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms