RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
TRAPPC10-207ENST00000468864 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 ERICH2A1L162 156 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 ZNF445P59923 1031 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 RAB11FIP4Q86YS3 637 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 DDX19AQ9NUU7 478 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 RTEL1-TNFRSF6BF6WH68 1400 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 NUP160Q12769 1436 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 ASXL1Q8IXJ9 1541 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 SNW1Q13573 536 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 FILIP1LQ4L180 1135 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
TRAPPC10-207ENST00000468864 GPATCH8Q9UKJ3 1502 aaKnown RBP12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
TRAPPC10-207ENST00000468864 F13A1P00488 732 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 ERCC4Q92889 916 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 IL16Q14005 1332 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 KDM6BO15054 1643 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 SYT1P21579 422 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 TYRO3Q06418 890 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 LMAN1P49257 510 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 AK2P54819 239 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 ARHGAP29Q52LW3 1261 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 TIGD1Q96MW7 591 aa12.39□□□□□ -0.43
TRAPPC10-207ENST00000468864 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 IDI1Q13907 227 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 ERLIN1O75477 346 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 EIF3JO75822 258 aaKnown RBP12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 KRT32Q14532 448 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 CCAR1Q8IX12 1150 aaKnown RBP12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 RHPN1Q8TCX5 695 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 ABCA8O94911 1581 aa12.38□□□□□ -0.43
TRAPPC10-207ENST00000468864 BMS1Q14692 1282 aaKnown RBP12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 CENPHQ9H3R5 247 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 SMTNL1A8MU46 457 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 RAD21O60216 631 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 NOS1P29475 1434 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 MYRIPQ8NFW9 859 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 USP19O94966 1318 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 HSP90AB3PQ58FF7 597 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 PPP1R9BQ96SB3 815 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 C14orf93Q9H972 538 aaKnown RBP12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
TRAPPC10-207ENST00000468864 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 GNG11P61952 73 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 GTF3C6Q969F1 213 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 SYTL4Q96C24 671 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 PZPP20742 1482 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms