RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C19orf44Q9H6X5 657 aa19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 PALD1Q9ULE6 856 aa19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 TAF7Q15545 349 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 STAP2Q9UGK3 403 aa19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 C1orf167Q5SNV9 1468 aa19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 SRCIN1Q9C0H9 1055 aa19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 RBM27Q9P2N5 1060 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 FAM208AQ9UK61 1670 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 USP44Q9H0E7 712 aa19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 ARHGEF25Q86VW2 580 aa19.21■□□□□ 0.67
TSPAN4-211ENST00000468468 UBTFL1P0CB47 393 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 DDX17Q92841 729 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 ANAPC15P60006 121 aa19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 NOL8Q76FK4 1167 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 UNC5CLQ8IV45 518 aa19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 RBSNQ9H1K0 784 aa19.2■□□□□ 0.66
TSPAN4-211ENST00000468468 HSPA2P54652 639 aa19.19■□□□□ 0.66
TSPAN4-211ENST00000468468 PRIM1P49642 420 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-211ENST00000468468 CUL4AQ13619 759 aa19.19■□□□□ 0.66
TSPAN4-211ENST00000468468 IL1RAPL2Q9NP60 686 aa19.19■□□□□ 0.66
TSPAN4-211ENST00000468468 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
TSPAN4-211ENST00000468468 TMEM94Q12767 1356 aa19.18■□□□□ 0.66
TSPAN4-211ENST00000468468 RGPD2P0DJD1 1756 aa19.18■□□□□ 0.66
TSPAN4-211ENST00000468468 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
TSPAN4-211ENST00000468468 PHAXQ9H814 394 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-211ENST00000468468 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
TSPAN4-211ENST00000468468 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-211ENST00000468468 LGR6Q9HBX8 967 aa19.17■□□□□ 0.66
TSPAN4-211ENST00000468468 AXIN2Q9Y2T1 843 aa19.17■□□□□ 0.66
TSPAN4-211ENST00000468468 SLIT3O75094 1523 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 BRD1O95696 1058 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 SSH3Q8TE77 659 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 TMEM63CQ9P1W3 806 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 AOX1Q06278 1338 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 ATF3P18847 181 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 NSFL1CQ9UNZ2 370 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 TRPM3Q9HCF6 1732 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
TSPAN4-211ENST00000468468 ANKRD24Q8TF21 1146 aa19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 INTS4Q96HW7 963 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 UPF3BQ9BZI7 483 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 SURF6O75683 361 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
TSPAN4-211ENST00000468468 CACNA1FO60840 1977 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 SYCE3A1L190 88 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 RAB11FIP3O75154 756 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 LRSAM1Q6UWE0 723 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 IL25Q9H293 177 aa19.14■□□□□ 0.65
TSPAN4-211ENST00000468468 MST1RQ04912 1400 aa19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 MAP4K4O95819 1239 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 MBD3O95983 291 aa19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 CEMIPQ8WUJ3 1361 aa19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 IL17RAQ96F46 866 aa19.13■□□□□ 0.65
TSPAN4-211ENST00000468468 MSNP26038 577 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-211ENST00000468468 POLA2Q14181 598 aa19.12■□□□□ 0.65
TSPAN4-211ENST00000468468 MPRIPQ6WCQ1 1025 aa19.12■□□□□ 0.65
TSPAN4-211ENST00000468468 RHPN1Q8TCX5 695 aa19.12■□□□□ 0.65
TSPAN4-211ENST00000468468 HSPA4P34932 840 aa19.11■□□□□ 0.65
TSPAN4-211ENST00000468468 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
TSPAN4-211ENST00000468468 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-211ENST00000468468 SRGAP3O43295 1099 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 KCNQ3O43525 872 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 PDLIM2Q96JY6 352 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 PXDNQ92626 1479 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 PI4K2BQ8TCG2 481 aa19.1■□□□□ 0.65
TSPAN4-211ENST00000468468 NBPF7P0C2Y1 421 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-211ENST00000468468 HS1BP3Q53T59 392 aa19.09■□□□□ 0.65
TSPAN4-211ENST00000468468 KIF1BPQ96EK5 621 aa19.09■□□□□ 0.65
TSPAN4-211ENST00000468468 EIF4A1P60842 406 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-211ENST00000468468 CABLES1Q8TDN4 633 aa19.09■□□□□ 0.65
TSPAN4-211ENST00000468468 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-211ENST00000468468 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-211ENST00000468468 CHPF2Q9P2E5 772 aa19.08■□□□□ 0.65
TSPAN4-211ENST00000468468 MED1Q15648 1581 aaPredicted RBP19.08■□□□□ 0.65
TSPAN4-211ENST00000468468 SGSM2O43147 1006 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 TEFQ10587 303 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 DNAAF4Q8WXU2 420 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 PI4KAP2A4QPH2 592 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 PI4KAP1Q8N8J0 262 aa19.07■□□□□ 0.64
TSPAN4-211ENST00000468468 ERBB3P21860 1342 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 ALS2Q96Q42 1657 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 KCNA4P22459 653 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 RBM10P98175 930 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 RAD50Q92878 1312 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 375.4 ms