RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
RBM39-226ENST00000468086 SCHIP1Q9P0W5 487 aaPredicted RBP9.32□□□□□ -0.92
RBM39-226ENST00000468086 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
RBM39-226ENST00000468086 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
RBM39-226ENST00000468086 IGF1RP08069 1367 aa9.32□□□□□ -0.92
RBM39-226ENST00000468086 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
RBM39-226ENST00000468086 GPAT2Q6NUI2 795 aa9.31□□□□□ -0.92
RBM39-226ENST00000468086 C1orf216Q8TAB5 229 aa9.31□□□□□ -0.92
RBM39-226ENST00000468086 FAM196BA6NMK8 535 aa9.3□□□□□ -0.92
RBM39-226ENST00000468086 DKK1O94907 266 aa9.3□□□□□ -0.92
RBM39-226ENST00000468086 PHKA2P46019 1235 aa9.3□□□□□ -0.92
RBM39-226ENST00000468086 EPHA4P54764 986 aa9.3□□□□□ -0.92
RBM39-226ENST00000468086 C14orf37Q86TY3 774 aa9.3□□□□□ -0.92
RBM39-226ENST00000468086 IGHA1P01876 353 aa9.29□□□□□ -0.92
RBM39-226ENST00000468086 FOXK2Q01167 660 aa9.29□□□□□ -0.92
RBM39-226ENST00000468086 PTK7Q13308 1070 aa9.29□□□□□ -0.92
RBM39-226ENST00000468086 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
RBM39-226ENST00000468086 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
RBM39-226ENST00000468086 SEC13P55735 322 aa9.28□□□□□ -0.92
RBM39-226ENST00000468086 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
RBM39-226ENST00000468086 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 BCRP11274 1271 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 MSX1P28360 303 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 TEAD4Q15561 434 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
RBM39-226ENST00000468086 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
RBM39-226ENST00000468086 NSFL1CQ9UNZ2 370 aaKnown RBP9.27□□□□□ -0.93
RBM39-226ENST00000468086 MX2P20592 715 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
RBM39-226ENST00000468086 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 ACDQ96AP0 544 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 CRISPLD1Q9H336 500 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 ZDHHC3Q9NYG2 299 aa9.26□□□□□ -0.93
RBM39-226ENST00000468086 SFI1A8K8P3 1242 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L12C9JPN9 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L21D6R901 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 THBS1P07996 1170 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 SLC9A9Q8IVB4 645 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 CCDC97Q96F63 343 aaPredicted RBP9.25□□□□□ -0.93
RBM39-226ENST00000468086 GPAMQ9HCL2 828 aa9.25□□□□□ -0.93
RBM39-226ENST00000468086 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
RBM39-226ENST00000468086 NOS2P35228 1153 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 BEND7Q8N7W2 519 aaPredicted RBP9.24□□□□□ -0.93
RBM39-226ENST00000468086 AIDAQ96BJ3 306 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 USP3Q9Y6I4 520 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
RBM39-226ENST00000468086 RFX1P22670 979 aa9.23□□□□□ -0.93
RBM39-226ENST00000468086 PSMA6P60900 246 aaKnown RBP9.23□□□□□ -0.93
RBM39-226ENST00000468086 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
RBM39-226ENST00000468086 LRRC4BQ9NT99 713 aa9.23□□□□□ -0.93
RBM39-226ENST00000468086 SERTM1A2A2V5 107 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 HIRAP54198 1017 aaPredicted RBP9.22□□□□□ -0.93
RBM39-226ENST00000468086 DPYDQ12882 1025 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 NLRP8Q86W28 1048 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 STAG2Q8N3U4 1231 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
RBM39-226ENST00000468086 ARXQ96QS3 562 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
RBM39-226ENST00000468086 GPC6Q9Y625 555 aaPredicted RBP9.22□□□□□ -0.93
RBM39-226ENST00000468086 ATP4AP20648 1035 aa9.21□□□□□ -0.94
RBM39-226ENST00000468086 MAP2K3P46734 347 aa9.21□□□□□ -0.94
RBM39-226ENST00000468086 SRPK2P78362 688 aaKnown RBP9.21□□□□□ -0.94
RBM39-226ENST00000468086 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
RBM39-226ENST00000468086 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
RBM39-226ENST00000468086 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
RBM39-226ENST00000468086 ZDHHC1Q8WTX9 485 aa9.21□□□□□ -0.94
RBM39-226ENST00000468086 TSPAN10Q9H1Z9 355 aaPredicted RBP9.21□□□□□ -0.94
RBM39-226ENST00000468086 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
RBM39-226ENST00000468086 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
RBM39-226ENST00000468086 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 OIP5O43482 229 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 UBAP2LQ14157 1087 aaKnown RBP9.19□□□□□ -0.94
RBM39-226ENST00000468086 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 HINFPQ9BQA5 517 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 OXCT2Q9BYC2 517 aaPredicted RBP9.19□□□□□ -0.94
RBM39-226ENST00000468086 ZNF232Q9UNY5 417 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 ATAD2Q6PL18 1390 aa9.19□□□□□ -0.94
RBM39-226ENST00000468086 EML1O00423 815 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms