RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
SYN3-209ENST00000467824 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
SYN3-209ENST00000467824 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.34
SYN3-209ENST00000467824 A0A087WZG4 1122 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 DPEP1P16444 411 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 DDR1Q08345 913 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
SYN3-209ENST00000467824 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
SYN3-209ENST00000467824 ADCY9O60503 1353 aa12.94□□□□□ -0.34
SYN3-209ENST00000467824 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
SYN3-209ENST00000467824 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
SYN3-209ENST00000467824 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
SYN3-209ENST00000467824 NEFMP07197 916 aa12.94□□□□□ -0.34
SYN3-209ENST00000467824 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
SYN3-209ENST00000467824 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
SYN3-209ENST00000467824 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
SYN3-209ENST00000467824 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
SYN3-209ENST00000467824 TM4SF1P30408 202 aa12.93□□□□□ -0.34
SYN3-209ENST00000467824 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
SYN3-209ENST00000467824 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
SYN3-209ENST00000467824 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
SYN3-209ENST00000467824 EIF5P55010 431 aaKnown RBP12.92□□□□□ -0.34
SYN3-209ENST00000467824 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
SYN3-209ENST00000467824 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
SYN3-209ENST00000467824 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
SYN3-209ENST00000467824 NFIXQ14938 502 aa12.91□□□□□ -0.34
SYN3-209ENST00000467824 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
SYN3-209ENST00000467824 KIAA1551Q9HCM1 1747 aa12.91□□□□□ -0.34
SYN3-209ENST00000467824 MCM10Q7L590 875 aa12.9□□□□□ -0.34
SYN3-209ENST00000467824 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
SYN3-209ENST00000467824 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
SYN3-209ENST00000467824 SERPINB2P05120 415 aa12.89□□□□□ -0.35
SYN3-209ENST00000467824 KCNA3P22001 575 aa12.89□□□□□ -0.35
SYN3-209ENST00000467824 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
SYN3-209ENST00000467824 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
SYN3-209ENST00000467824 CHRNA5P30532 468 aa12.88□□□□□ -0.35
SYN3-209ENST00000467824 CARMIL3Q8ND23 1372 aa12.87□□□□□ -0.35
SYN3-209ENST00000467824 KCNQ3O43525 872 aa12.87□□□□□ -0.35
SYN3-209ENST00000467824 A1BGP04217 495 aa12.87□□□□□ -0.35
SYN3-209ENST00000467824 TAF7Q15545 349 aaPredicted RBP12.87□□□□□ -0.35
SYN3-209ENST00000467824 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
SYN3-209ENST00000467824 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
SYN3-209ENST00000467824 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
SYN3-209ENST00000467824 SIPA1L3O60292 1781 aaPredicted RBP12.86□□□□□ -0.35
SYN3-209ENST00000467824 RALBP1Q15311 655 aa12.86□□□□□ -0.35
SYN3-209ENST00000467824 PNISRQ8TF01 805 aaKnown RBP12.86□□□□□ -0.35
SYN3-209ENST00000467824 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
SYN3-209ENST00000467824 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
SYN3-209ENST00000467824 H0YIN7 160 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 NPHP1O15259 732 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
SYN3-209ENST00000467824 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
SYN3-209ENST00000467824 CAMTA2O94983 1202 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 PDE6BP35913 854 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
SYN3-209ENST00000467824 SCN7AQ01118 1682 aa12.83□□□□□ -0.35
SYN3-209ENST00000467824 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
SYN3-209ENST00000467824 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 RGL2O15211 777 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
SYN3-209ENST00000467824 HSPA6P17066 643 aa12.82□□□□□ -0.36
SYN3-209ENST00000467824 ST5P78524 1137 aa12.82□□□□□ -0.36
SYN3-209ENST00000467824 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
SYN3-209ENST00000467824 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
SYN3-209ENST00000467824 PRAMEF22A3QJZ6 481 aa12.81□□□□□ -0.36
SYN3-209ENST00000467824 KIF3CO14782 793 aa12.81□□□□□ -0.36
SYN3-209ENST00000467824 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
SYN3-209ENST00000467824 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
SYN3-209ENST00000467824 ZC3H4Q9UPT8 1303 aaKnown RBP12.81□□□□□ -0.36
SYN3-209ENST00000467824 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
SYN3-209ENST00000467824 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
SYN3-209ENST00000467824 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
SYN3-209ENST00000467824 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
SYN3-209ENST00000467824 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SYN3-209ENST00000467824 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
SYN3-209ENST00000467824 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
SYN3-209ENST00000467824 TOMM70O94826 608 aa12.79□□□□□ -0.36
SYN3-209ENST00000467824 LMNB1P20700 586 aa12.79□□□□□ -0.36
SYN3-209ENST00000467824 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
SYN3-209ENST00000467824 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
SYN3-209ENST00000467824 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYN3-209ENST00000467824 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
SYN3-209ENST00000467824 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
SYN3-209ENST00000467824 RASSF7Q02833 373 aa12.78□□□□□ -0.36
SYN3-209ENST00000467824 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
SYN3-209ENST00000467824 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
SYN3-209ENST00000467824 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms