RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ZNF831Q5JPB2 1677 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
SCAF4-204ENST00000467731 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 ATP6V1AP38606 617 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 ALDH1L2Q3SY69 923 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 CCDC30Q5VVM6 783 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 MYH14Q7Z406 1995 aaKnown RBP8.8□□□□□ -1
SCAF4-204ENST00000467731 COL5A3P25940 1745 aaPredicted RBP8.8□□□□□ -1
SCAF4-204ENST00000467731 NEFLP07196 543 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 DNAJC10Q8IXB1 793 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 CCDC136Q96JN2 1154 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 KCNQ4P56696 695 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 CHPF2Q9P2E5 772 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 ITPK1Q13572 414 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 ARXQ96QS3 562 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 STK31Q9BXU1 1019 aa8.79□□□□□ -1
SCAF4-204ENST00000467731 APBA3O96018 575 aa8.78□□□□□ -1
SCAF4-204ENST00000467731 ANXA1P04083 346 aa8.78□□□□□ -1
SCAF4-204ENST00000467731 SLC4A2P04920 1241 aa8.78□□□□□ -1
SCAF4-204ENST00000467731 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
SCAF4-204ENST00000467731 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
SCAF4-204ENST00000467731 TEX13AQ9BXU3 409 aaPredicted RBP8.78□□□□□ -1
SCAF4-204ENST00000467731 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
SCAF4-204ENST00000467731 CCNL1Q9UK58 526 aaPredicted RBP8.78□□□□□ -1
SCAF4-204ENST00000467731 PLIN1O60240 522 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 STARD3NLO95772 234 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 PDIA6Q15084 440 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 FRAT1Q92837 279 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-204ENST00000467731 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-204ENST00000467731 RGPD3A6NKT7 1758 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-204ENST00000467731 RGPD4Q7Z3J3 1758 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 PLSCR1O15162 318 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 A1BGP04217 495 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 CYP19A1P11511 503 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-204ENST00000467731 MYL6BP14649 208 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 BRPF1P55201 1214 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-204ENST00000467731 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 KIF16BQ96L93 1317 aa8.77□□□□□ -1.01
SCAF4-204ENST00000467731 RRP1P56182 461 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 G2E3Q7L622 706 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 DDX21Q9NR30 783 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 NOB1Q9ULX3 412 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 RNF123Q5XPI4 1314 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 NBPF10Q6P3W6 841 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 RREB1Q92766 1687 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 CRKLP46109 303 aaKnown RBP8.76□□□□□ -1.01
SCAF4-204ENST00000467731 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 PROM2Q8N271 834 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 ZBTB1Q9Y2K1 713 aa8.76□□□□□ -1.01
SCAF4-204ENST00000467731 C4BP0C0L5 1744 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 FLIIQ13045 1269 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 TXNRD1Q16881 649 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 HYPKQ9NX55 129 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 ERBB4Q15303 1308 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 SLC27A3Q5K4L6 730 aa8.75□□□□□ -1.01
SCAF4-204ENST00000467731 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
SCAF4-204ENST00000467731 ZNF330Q9Y3S2 320 aaPredicted RBP8.75□□□□□ -1.01
SCAF4-204ENST00000467731 TRIM27P14373 513 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 EN1Q05925 392 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-204ENST00000467731 SF3B2Q13435 895 aaKnown RBP8.74□□□□□ -1.01
SCAF4-204ENST00000467731 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
SCAF4-204ENST00000467731 CCDC87Q9NVE4 849 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 TNNQ9UQP3 1299 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 PTPRCP08575 1304 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
SCAF4-204ENST00000467731 FKBP5Q13451 457 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-204ENST00000467731 ATF7IPQ6VMQ6 1270 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
SCAF4-204ENST00000467731 CNTNAP4Q9C0A0 1308 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 IPO8O15397 1037 aaKnown RBP8.73□□□□□ -1.01
SCAF4-204ENST00000467731 C20orf194Q5TEA3 1177 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 UBR3Q6ZT12 1888 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 IRX6P78412 446 aaPredicted RBP8.73□□□□□ -1.01
SCAF4-204ENST00000467731 EZH2Q15910 746 aaKnown RBP8.73□□□□□ -1.01
SCAF4-204ENST00000467731 COPS6Q7L5N1 327 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 DEFB132Q7Z7B7 95 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 XAGE3Q8WTP9 111 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 CAMKK2Q96RR4 588 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 ARFGEF2Q9Y6D5 1785 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 IL6STP40189 918 aaPredicted RBP8.73□□□□□ -1.01
SCAF4-204ENST00000467731 BAG6P46379 1132 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 ARHGAP45Q92619 1136 aa8.73□□□□□ -1.01
SCAF4-204ENST00000467731 F6X3S4 739 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 PDIA4P13667 645 aaKnown RBP8.72□□□□□ -1.01
SCAF4-204ENST00000467731 TTLL7Q6ZT98 887 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
SCAF4-204ENST00000467731 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 PI4KAP2A4QPH2 592 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 GNPATO15228 680 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 RLBP1P12271 317 aa8.72□□□□□ -1.01
SCAF4-204ENST00000467731 EIF5P55010 431 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms