RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
TMEM254-209ENST00000467529 PDIA6Q15084 440 aa11.22□□□□□ -0.61
TMEM254-209ENST00000467529 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
TMEM254-209ENST00000467529 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
TMEM254-209ENST00000467529 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
TMEM254-209ENST00000467529 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.61
TMEM254-209ENST00000467529 HMMRO75330 724 aa11.21□□□□□ -0.61
TMEM254-209ENST00000467529 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
TMEM254-209ENST00000467529 UBTFL1P0CB47 393 aaPredicted RBP11.21□□□□□ -0.62
TMEM254-209ENST00000467529 ATP8B2P98198 1209 aa11.21□□□□□ -0.62
TMEM254-209ENST00000467529 KSR2Q6VAB6 950 aa11.21□□□□□ -0.62
TMEM254-209ENST00000467529 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.62
TMEM254-209ENST00000467529 USP16Q9Y5T5 823 aa11.21□□□□□ -0.62
TMEM254-209ENST00000467529 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.62
TMEM254-209ENST00000467529 GLI3P10071 1580 aa11.2□□□□□ -0.62
TMEM254-209ENST00000467529 TOGARAM1Q9Y4F4 1720 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 PAPPAQ13219 1627 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 TOM1O60784 492 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
TMEM254-209ENST00000467529 MYL6BP14649 208 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 PIP4K2BP78356 416 aa11.19□□□□□ -0.62
TMEM254-209ENST00000467529 AIMP1Q12904 312 aaKnown RBP11.19□□□□□ -0.62
TMEM254-209ENST00000467529 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
TMEM254-209ENST00000467529 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 UBR2Q8IWV8 1755 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 APBB1O00213 710 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 SMARCA5O60264 1052 aaPredicted RBP11.18□□□□□ -0.62
TMEM254-209ENST00000467529 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
TMEM254-209ENST00000467529 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
TMEM254-209ENST00000467529 BMP2KLQ5H9B9 411 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
TMEM254-209ENST00000467529 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
TMEM254-209ENST00000467529 PLCH1Q4KWH8 1693 aa11.18□□□□□ -0.62
TMEM254-209ENST00000467529 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 LRP10Q7Z4F1 713 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 DDRGK1Q96HY6 314 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
TMEM254-209ENST00000467529 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 PIP4K2AP48426 406 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-209ENST00000467529 CWF19L2Q2TBE0 894 aaKnown RBP11.16□□□□□ -0.62
TMEM254-209ENST00000467529 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 LINS1Q8NG48 757 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-209ENST00000467529 SSH3Q8TE77 659 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 BCL11AQ9H165 835 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 POLA2Q14181 598 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
TMEM254-209ENST00000467529 TNS2Q63HR2 1409 aa11.15□□□□□ -0.62
TMEM254-209ENST00000467529 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
TMEM254-209ENST00000467529 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
TMEM254-209ENST00000467529 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
TMEM254-209ENST00000467529 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
TMEM254-209ENST00000467529 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
TMEM254-209ENST00000467529 C9orf78Q9NZ63 289 aaPredicted RBP11.15□□□□□ -0.62
TMEM254-209ENST00000467529 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.63
TMEM254-209ENST00000467529 PTCD1O75127 700 aaKnown RBP11.14□□□□□ -0.63
TMEM254-209ENST00000467529 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 GSPT1P15170 499 aaKnown RBP11.14□□□□□ -0.63
TMEM254-209ENST00000467529 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 ITGB4P16144 1822 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 ERBB4Q15303 1308 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 EXOC5O00471 708 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 NBPF10Q6P3W6 841 aaKnown RBP11.14□□□□□ -0.63
TMEM254-209ENST00000467529 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 METTL22Q9BUU2 404 aaPredicted RBP11.14□□□□□ -0.63
TMEM254-209ENST00000467529 LRRCC1Q9C099 1032 aa11.14□□□□□ -0.63
TMEM254-209ENST00000467529 UTYO14607 1347 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 GRM8O00222 908 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
TMEM254-209ENST00000467529 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 PIGBQ92521 554 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 MYD88Q99836 296 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 SPATA31A1Q5TZJ5 1347 aa11.13□□□□□ -0.63
TMEM254-209ENST00000467529 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 NEURL1BA8MQ27 555 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 A1BGP04217 495 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 MTX1Q13505 466 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 HDAC5Q9UQL6 1122 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 LRP6O75581 1613 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
TMEM254-209ENST00000467529 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 ASAP1Q9ULH1 1129 aa11.12□□□□□ -0.63
TMEM254-209ENST00000467529 SALL3Q9BXA9 1300 aa11.11□□□□□ -0.63
TMEM254-209ENST00000467529 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms