RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
PRPF3-202ENST00000467329 HSPA1LP34931 641 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-202ENST00000467329 PDIA6Q15084 440 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 DDB1Q16531 1140 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
PRPF3-202ENST00000467329 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
PRPF3-202ENST00000467329 GNAI3P08754 354 aa11.88□□□□□ -0.51
PRPF3-202ENST00000467329 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
PRPF3-202ENST00000467329 ADCY9O60503 1353 aa11.88□□□□□ -0.51
PRPF3-202ENST00000467329 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-202ENST00000467329 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
PRPF3-202ENST00000467329 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
PRPF3-202ENST00000467329 F6X3S4 739 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 DNAAF4Q8WXU2 420 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
PRPF3-202ENST00000467329 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
PRPF3-202ENST00000467329 SLC4A10Q6U841 1118 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 PIGBQ92521 554 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 GCC1Q96CN9 775 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 ATRNO75882 1429 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 LRP10Q7Z4F1 713 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 MEIS3Q99687 375 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
PRPF3-202ENST00000467329 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
PRPF3-202ENST00000467329 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 USP21Q9UK80 565 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 GNAI2P04899 355 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
PRPF3-202ENST00000467329 PI4KAP2A4QPH2 592 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 PI4KAP1Q8N8J0 262 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
PRPF3-202ENST00000467329 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-202ENST00000467329 TJP1Q07157 1748 aa11.84□□□□□ -0.51
PRPF3-202ENST00000467329 HMMRO75330 724 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 ANXA1P04083 346 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 NUCB1Q02818 461 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
PRPF3-202ENST00000467329 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 RREB1Q92766 1687 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 UTYO14607 1347 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 UBTFL1P0CB47 393 aaPredicted RBP11.82□□□□□ -0.52
PRPF3-202ENST00000467329 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 ASAP1Q9ULH1 1129 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 AFF2P51816 1311 aa11.82□□□□□ -0.52
PRPF3-202ENST00000467329 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
PRPF3-202ENST00000467329 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
PRPF3-202ENST00000467329 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
PRPF3-202ENST00000467329 STARD3NLO95772 234 aa11.81□□□□□ -0.52
PRPF3-202ENST00000467329 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
PRPF3-202ENST00000467329 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
PRPF3-202ENST00000467329 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
PRPF3-202ENST00000467329 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
PRPF3-202ENST00000467329 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
PRPF3-202ENST00000467329 COL15A1P39059 1388 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-202ENST00000467329 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
PRPF3-202ENST00000467329 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
PRPF3-202ENST00000467329 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 MYL6BP14649 208 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
PRPF3-202ENST00000467329 GJD4Q96KN9 370 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-202ENST00000467329 CHD1LQ86WJ1 897 aa11.79□□□□□ -0.52
PRPF3-202ENST00000467329 MTX1Q13505 466 aa11.78□□□□□ -0.52
PRPF3-202ENST00000467329 DNAJC10Q8IXB1 793 aa11.78□□□□□ -0.52
PRPF3-202ENST00000467329 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
PRPF3-202ENST00000467329 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
PRPF3-202ENST00000467329 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
PRPF3-202ENST00000467329 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.52
PRPF3-202ENST00000467329 A1BGP04217 495 aa11.77□□□□□ -0.52
PRPF3-202ENST00000467329 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.52
PRPF3-202ENST00000467329 RGS3P49796 1198 aa11.77□□□□□ -0.52
PRPF3-202ENST00000467329 GRM8O00222 908 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 PDE4AP27815 886 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 POLA2Q14181 598 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms