RNA–Protein interactions for RNA: ENST00000467286.1

CRAMP1-205, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 664 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-205ENST00000467286 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 STARD3NLO95772 234 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 DDR1Q08345 913 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 GPBP1L1Q9HC44 474 aaPredicted RBP18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
CRAMP1-205ENST00000467286 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
CRAMP1-205ENST00000467286 DPEP1P16444 411 aa18.61■□□□□ 0.57
CRAMP1-205ENST00000467286 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
CRAMP1-205ENST00000467286 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 POLRMTO00411 1230 aaKnown RBP18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 ZNF790Q6PG37 636 aa18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
CRAMP1-205ENST00000467286 FCHSD2O94868 740 aa18.59■□□□□ 0.57
CRAMP1-205ENST00000467286 TEX13AQ9BXU3 409 aaPredicted RBP18.59■□□□□ 0.57
CRAMP1-205ENST00000467286 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 TM4SF1P30408 202 aa18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 ZNF526Q8TF50 670 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 PIM2Q9P1W9 311 aa18.58■□□□□ 0.56
CRAMP1-205ENST00000467286 A0A087WZG4 1122 aa18.57■□□□□ 0.56
CRAMP1-205ENST00000467286 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
CRAMP1-205ENST00000467286 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
CRAMP1-205ENST00000467286 BCORQ6W2J9 1755 aa18.56■□□□□ 0.56
CRAMP1-205ENST00000467286 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
CRAMP1-205ENST00000467286 BTBD11A6QL63 1104 aa18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 KCNA3P22001 575 aa18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 EIF5P55010 431 aaKnown RBP18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 NFIXQ14938 502 aa18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 DALRD3Q5D0E6 543 aaKnown RBP18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 NPM2Q86SE8 214 aaKnown RBP18.55■□□□□ 0.56
CRAMP1-205ENST00000467286 SBF1O95248 1867 aa18.53■□□□□ 0.56
CRAMP1-205ENST00000467286 NEFMP07197 916 aa18.53■□□□□ 0.56
CRAMP1-205ENST00000467286 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
CRAMP1-205ENST00000467286 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
CRAMP1-205ENST00000467286 CHRNA5P30532 468 aa18.52■□□□□ 0.56
CRAMP1-205ENST00000467286 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
CRAMP1-205ENST00000467286 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
CRAMP1-205ENST00000467286 SERPINB2P05120 415 aa18.51■□□□□ 0.55
CRAMP1-205ENST00000467286 MCM10Q7L590 875 aa18.51■□□□□ 0.55
CRAMP1-205ENST00000467286 ANKRD31Q8N7Z5 1873 aa18.51■□□□□ 0.55
CRAMP1-205ENST00000467286 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
CRAMP1-205ENST00000467286 CARMIL3Q8ND23 1372 aa18.5■□□□□ 0.55
CRAMP1-205ENST00000467286 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
CRAMP1-205ENST00000467286 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
CRAMP1-205ENST00000467286 KCNQ3O43525 872 aa18.48■□□□□ 0.55
CRAMP1-205ENST00000467286 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
CRAMP1-205ENST00000467286 COL11A2P13942 1736 aaPredicted RBP18.48■□□□□ 0.55
CRAMP1-205ENST00000467286 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 A1BGP04217 495 aa18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 SNRPA1P09661 255 aaKnown RBP18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 C9orf131Q5VYM1 1079 aa18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 CACNA1SQ13698 1873 aa18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 CCDC88AQ3V6T2 1871 aa18.47■□□□□ 0.55
CRAMP1-205ENST00000467286 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
CRAMP1-205ENST00000467286 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
CRAMP1-205ENST00000467286 H0YIN7 160 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 KIF3CO14782 793 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 NPHP1O15259 732 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 TTLL6Q8N841 843 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 PDZRN3Q9UPQ7 1066 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
CRAMP1-205ENST00000467286 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
CRAMP1-205ENST00000467286 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
CRAMP1-205ENST00000467286 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
CRAMP1-205ENST00000467286 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
CRAMP1-205ENST00000467286 PDE6BP35913 854 aa18.43■□□□□ 0.54
CRAMP1-205ENST00000467286 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
CRAMP1-205ENST00000467286 BRIP1Q9BX63 1249 aa18.43■□□□□ 0.54
CRAMP1-205ENST00000467286 ZNF652Q9Y2D9 606 aa18.43■□□□□ 0.54
CRAMP1-205ENST00000467286 USP16Q9Y5T5 823 aa18.43■□□□□ 0.54
CRAMP1-205ENST00000467286 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 HSPA6P17066 643 aa18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 ST5P78524 1137 aa18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 PNISRQ8TF01 805 aaKnown RBP18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
CRAMP1-205ENST00000467286 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
CRAMP1-205ENST00000467286 FER1L6Q2WGJ9 1857 aa18.41■□□□□ 0.54
CRAMP1-205ENST00000467286 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
CRAMP1-205ENST00000467286 RASSF7Q02833 373 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 RALBP1Q15311 655 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
CRAMP1-205ENST00000467286 TOMM70O94826 608 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms