RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 KCNB2Q92953 911 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 ZRANB1Q9UGI0 708 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
CHD1L-205ENST00000467213 ZSCAN31Q96LW9 406 aaPredicted RBP18.67■□□□□ 0.58
CHD1L-205ENST00000467213 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
CHD1L-205ENST00000467213 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
CHD1L-205ENST00000467213 MCM10Q7L590 875 aa18.67■□□□□ 0.58
CHD1L-205ENST00000467213 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
CHD1L-205ENST00000467213 FEZ1Q99689 392 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 SH2B1Q9NRF2 756 aaPredicted RBP18.66■□□□□ 0.58
CHD1L-205ENST00000467213 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
CHD1L-205ENST00000467213 SYT1P21579 422 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 CCDC30Q5VVM6 783 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 G2E3Q7L622 706 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CHD1L-205ENST00000467213 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
CHD1L-205ENST00000467213 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
CHD1L-205ENST00000467213 ELP1O95163 1332 aa18.65■□□□□ 0.58
CHD1L-205ENST00000467213 POLA2Q14181 598 aa18.65■□□□□ 0.58
CHD1L-205ENST00000467213 RILPL2Q969X0 211 aa18.65■□□□□ 0.58
CHD1L-205ENST00000467213 LSG1Q9H089 658 aaKnown RBP18.65■□□□□ 0.58
CHD1L-205ENST00000467213 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
CHD1L-205ENST00000467213 PLEKHG3A1L390 1219 aa18.64■□□□□ 0.58
CHD1L-205ENST00000467213 TTC12Q9H892 705 aaPredicted RBP18.64■□□□□ 0.58
CHD1L-205ENST00000467213 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.58
CHD1L-205ENST00000467213 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.58
CHD1L-205ENST00000467213 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.57
CHD1L-205ENST00000467213 FLIIQ13045 1269 aa18.64■□□□□ 0.57
CHD1L-205ENST00000467213 UPF3BQ9BZI7 483 aaKnown RBP18.64■□□□□ 0.57
CHD1L-205ENST00000467213 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 CCDC192P0DO97 292 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 PI4K2BQ8TCG2 481 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 GDPD2Q9HCC8 539 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 USP6P35125 1406 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 SMC3Q9UQE7 1217 aa18.63■□□□□ 0.57
CHD1L-205ENST00000467213 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
CHD1L-205ENST00000467213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.62■□□□□ 0.57
CHD1L-205ENST00000467213 USP54Q70EL1 1684 aa18.62■□□□□ 0.57
CHD1L-205ENST00000467213 F6X3S4 739 aa18.62■□□□□ 0.57
CHD1L-205ENST00000467213 AK2P54819 239 aa18.62■□□□□ 0.57
CHD1L-205ENST00000467213 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
CHD1L-205ENST00000467213 UNC5CLQ8IV45 518 aa18.62■□□□□ 0.57
CHD1L-205ENST00000467213 PTPRUQ92729 1446 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 METP08581 1390 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 RUFY3Q7L099 469 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 KCNF1Q9H3M0 494 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 PDCL2Q8N4E4 241 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
CHD1L-205ENST00000467213 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 FAM200AQ8TCP9 573 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 MTMR6Q9Y217 621 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 ZNF830Q96NB3 372 aaPredicted RBP18.6■□□□□ 0.57
CHD1L-205ENST00000467213 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 PRR36Q9H6K5 1346 aa18.6■□□□□ 0.57
CHD1L-205ENST00000467213 PPP4R3BQ5MIZ7 849 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
CHD1L-205ENST00000467213 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 CAVIN2O95810 425 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 USP44Q9H0E7 712 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
CHD1L-205ENST00000467213 RIMS1Q86UR5 1692 aaKnown RBP18.59■□□□□ 0.57
CHD1L-205ENST00000467213 FLT4P35916 1363 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 ZSWIM6Q9HCJ5 1215 aa18.59■□□□□ 0.57
CHD1L-205ENST00000467213 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
CHD1L-205ENST00000467213 IL25Q9H293 177 aa18.58■□□□□ 0.56
CHD1L-205ENST00000467213 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.56
CHD1L-205ENST00000467213 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.56
CHD1L-205ENST00000467213 TAF3Q5VWG9 929 aa18.58■□□□□ 0.56
CHD1L-205ENST00000467213 LRRFIP2Q9Y608 721 aaKnown RBP18.58■□□□□ 0.56
CHD1L-205ENST00000467213 UBTFL1P0CB47 393 aaPredicted RBP18.57■□□□□ 0.56
CHD1L-205ENST00000467213 RIOK3O14730 519 aaKnown RBP18.57■□□□□ 0.56
CHD1L-205ENST00000467213 AP5Z1O43299 807 aa18.57■□□□□ 0.56
CHD1L-205ENST00000467213 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
CHD1L-205ENST00000467213 RHPN1Q8TCX5 695 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 SNRKQ9NRH2 765 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 PAXBP1Q9Y5B6 917 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 SMTNL1A8MU46 457 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 NOL8Q76FK4 1167 aaKnown RBP18.56■□□□□ 0.56
CHD1L-205ENST00000467213 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
CHD1L-205ENST00000467213 PDCP20941 246 aa18.55■□□□□ 0.56
CHD1L-205ENST00000467213 CDC25BP30305 580 aa18.55■□□□□ 0.56
CHD1L-205ENST00000467213 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
CHD1L-205ENST00000467213 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
CHD1L-205ENST00000467213 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
CHD1L-205ENST00000467213 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
CHD1L-205ENST00000467213 RASEFQ8IZ41 740 aa18.54■□□□□ 0.56
CHD1L-205ENST00000467213 FIBPO43427 364 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms