RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 BEND3Q5T5X7 828 aa12.71□□□□□ -0.38
UFD1-206ENST00000466373 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.38
UFD1-206ENST00000466373 TMX3Q96JJ7 454 aa12.71□□□□□ -0.38
UFD1-206ENST00000466373 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.38
UFD1-206ENST00000466373 CHD2O14647 1828 aaKnown RBP12.71□□□□□ -0.38
UFD1-206ENST00000466373 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
UFD1-206ENST00000466373 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
UFD1-206ENST00000466373 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
UFD1-206ENST00000466373 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
UFD1-206ENST00000466373 CYP2E1P05181 493 aaPredicted RBP12.7□□□□□ -0.38
UFD1-206ENST00000466373 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 MCCP23508 829 aa12.69□□□□□ -0.38
UFD1-206ENST00000466373 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 ARHGEF25Q86VW2 580 aa12.69□□□□□ -0.38
UFD1-206ENST00000466373 PXDNQ92626 1479 aa12.69□□□□□ -0.38
UFD1-206ENST00000466373 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 FOXD4L6Q3SYB3 417 aaPredicted RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 FOXD4L3Q6VB84 417 aaPredicted RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 ADGRL3Q9HAR2 1447 aa12.69□□□□□ -0.38
UFD1-206ENST00000466373 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
UFD1-206ENST00000466373 MAP3K2Q9Y2U5 619 aa12.69□□□□□ -0.38
UFD1-206ENST00000466373 ADCY9O60503 1353 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
UFD1-206ENST00000466373 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 PTMSP20962 102 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 POLA2Q14181 598 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
UFD1-206ENST00000466373 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
UFD1-206ENST00000466373 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
UFD1-206ENST00000466373 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
UFD1-206ENST00000466373 LMBRD1Q9NUN5 540 aa12.67□□□□□ -0.38
UFD1-206ENST00000466373 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
UFD1-206ENST00000466373 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
UFD1-206ENST00000466373 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
UFD1-206ENST00000466373 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
UFD1-206ENST00000466373 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
UFD1-206ENST00000466373 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
UFD1-206ENST00000466373 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 HOXB7P09629 217 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 KRT28Q7Z3Y7 464 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
UFD1-206ENST00000466373 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
UFD1-206ENST00000466373 PROSER2Q86WR7 435 aaPredicted RBP12.65□□□□□ -0.38
UFD1-206ENST00000466373 DTNBO60941 627 aa12.64□□□□□ -0.39
UFD1-206ENST00000466373 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
UFD1-206ENST00000466373 GPT2Q8TD30 523 aa12.64□□□□□ -0.39
UFD1-206ENST00000466373 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
UFD1-206ENST00000466373 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
UFD1-206ENST00000466373 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
UFD1-206ENST00000466373 MYL6BP14649 208 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 ANAPC15P60006 121 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 KSR2Q6VAB6 950 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 AOX1Q06278 1338 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 PIP4K2AP48426 406 aaPredicted RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 NPHP4O75161 1426 aaPredicted RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 SGSM2O43147 1006 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 CPA1P15085 419 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 HSPA4P34932 840 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 NASPP49321 788 aaPredicted RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 MCM2P49736 904 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
UFD1-206ENST00000466373 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
UFD1-206ENST00000466373 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
UFD1-206ENST00000466373 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
UFD1-206ENST00000466373 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
UFD1-206ENST00000466373 SIL1Q9H173 461 aa12.62□□□□□ -0.39
UFD1-206ENST00000466373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
UFD1-206ENST00000466373 CUL4AQ13619 759 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
UFD1-206ENST00000466373 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
UFD1-206ENST00000466373 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 IFIT2P09913 472 aaKnown RBP12.61□□□□□ -0.39
UFD1-206ENST00000466373 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 AACSQ86V21 672 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 RAPGEF4Q8WZA2 1011 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 SUCLG2Q96I99 432 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
UFD1-206ENST00000466373 DIAPH3Q9NSV4 1193 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 SNX14Q9Y5W7 946 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 RAD50Q92878 1312 aa12.61□□□□□ -0.39
UFD1-206ENST00000466373 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 CCDC8Q9H0W5 538 aaPredicted RBP12.6□□□□□ -0.39
UFD1-206ENST00000466373 ERBB3P21860 1342 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms