RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ARSIQ5FYB1 569 aa9.14□□□□□ -0.95
TPM3-214ENST00000466010 TFIP11Q9UBB9 837 aaKnown RBP9.14□□□□□ -0.95
TPM3-214ENST00000466010 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
TPM3-214ENST00000466010 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
TPM3-214ENST00000466010 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
TPM3-214ENST00000466010 GPR37L1O60883 481 aa9.11□□□□□ -0.95
TPM3-214ENST00000466010 EIF4G2P78344 907 aaKnown RBP eCLIP9.11□□□□□ -0.95
TPM3-214ENST00000466010 NGDNQ8NEJ9 315 aaKnown RBP9.11□□□□□ -0.95
TPM3-214ENST00000466010 LRRN4Q8WUT4 740 aa9.11□□□□□ -0.95
TPM3-214ENST00000466010 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
TPM3-214ENST00000466010 PCDHGC3Q9UN70 934 aa9.11□□□□□ -0.95
TPM3-214ENST00000466010 MAFBQ9Y5Q3 323 aaPredicted RBP9.11□□□□□ -0.95
TPM3-214ENST00000466010 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 PRR7Q8TB68 274 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
TPM3-214ENST00000466010 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 ATRNO75882 1429 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 ITSN1Q15811 1721 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 ARHGEF28Q8N1W1 1705 aaKnown RBP9.1□□□□□ -0.95
TPM3-214ENST00000466010 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
TPM3-214ENST00000466010 USP32Q8NFA0 1604 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 BCL9LQ86UU0 1499 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
TPM3-214ENST00000466010 CARNS1A5YM72 827 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 GUCA2AQ02747 115 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 PMFBP1Q8TBY8 1022 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
TPM3-214ENST00000466010 LHX6Q9UPM6 363 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 SLIT2O94813 1529 aa9.09□□□□□ -0.95
TPM3-214ENST00000466010 BRD4O60885 1362 aaPredicted RBP9.09□□□□□ -0.95
TPM3-214ENST00000466010 ATP7BP35670 1465 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.08□□□□□ -0.96
TPM3-214ENST00000466010 MARF1Q9Y4F3 1742 aaKnown RBP9.08□□□□□ -0.96
TPM3-214ENST00000466010 PRR36Q9H6K5 1346 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 RGS12O14924 1447 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 CDK19Q9BWU1 502 aa9.08□□□□□ -0.96
TPM3-214ENST00000466010 GNEQ9Y223 722 aaKnown RBP9.08□□□□□ -0.96
TPM3-214ENST00000466010 POLR3AO14802 1390 aaPredicted RBP9.08□□□□□ -0.96
TPM3-214ENST00000466010 SMAPO00193 183 aa9.07□□□□□ -0.96
TPM3-214ENST00000466010 ATP9BO43861 1147 aa9.07□□□□□ -0.96
TPM3-214ENST00000466010 CCDC125Q86Z20 511 aa9.07□□□□□ -0.96
TPM3-214ENST00000466010 CCER1Q8TC90 406 aaPredicted RBP9.07□□□□□ -0.96
TPM3-214ENST00000466010 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
TPM3-214ENST00000466010 RGPD8O14715 1765 aaPredicted RBP9.07□□□□□ -0.96
TPM3-214ENST00000466010 CFAP99D6REC4 459 aa9.06□□□□□ -0.96
TPM3-214ENST00000466010 VPS72Q15906 364 aa9.06□□□□□ -0.96
TPM3-214ENST00000466010 NBPF1Q3BBV0 1214 aa9.06□□□□□ -0.96
TPM3-214ENST00000466010 GPR153Q6NV75 609 aa9.06□□□□□ -0.96
TPM3-214ENST00000466010 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
TPM3-214ENST00000466010 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
TPM3-214ENST00000466010 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
TPM3-214ENST00000466010 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
TPM3-214ENST00000466010 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 TONSLQ96HA7 1378 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 ELOAQ14241 798 aaKnown RBP9.04□□□□□ -0.96
TPM3-214ENST00000466010 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 HLA-CQ95604 372 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 EP400Q96L91 3159 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 ACEP12821 1306 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 TOPAZ1Q8N9V7 1692 aa9.04□□□□□ -0.96
TPM3-214ENST00000466010 RALGAPBQ86X10 1494 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 SBNO2Q9Y2G9 1366 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 TRPM1Q7Z4N2 1603 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 SLC10A3P09131 477 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
TPM3-214ENST00000466010 NR6A1Q15406 480 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 SWT1Q5T5J6 900 aaKnown RBP9.03□□□□□ -0.96
TPM3-214ENST00000466010 SIN3AQ96ST3 1273 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 PRDM11Q9NQV5 511 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 PPIP5K1Q6PFW1 1433 aa9.03□□□□□ -0.96
TPM3-214ENST00000466010 ABCA3Q99758 1704 aa9.02□□□□□ -0.96
TPM3-214ENST00000466010 COL14A1Q05707 1796 aaKnown RBP9.02□□□□□ -0.97
TPM3-214ENST00000466010 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 IGSF3O75054 1194 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 NLRP13Q86W25 1043 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 BTG4Q9NY30 223 aa9.02□□□□□ -0.97
TPM3-214ENST00000466010 PLCH1Q4KWH8 1693 aa9.01□□□□□ -0.97
TPM3-214ENST00000466010 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
TPM3-214ENST00000466010 ERCC3P19447 782 aa9.01□□□□□ -0.97
TPM3-214ENST00000466010 NR1H3Q13133 447 aa9.01□□□□□ -0.97
TPM3-214ENST00000466010 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
TPM3-214ENST00000466010 CPDO75976 1380 aa9□□□□□ -0.97
TPM3-214ENST00000466010 ATP6V1AP38606 617 aa9□□□□□ -0.97
TPM3-214ENST00000466010 FUT2Q10981 343 aa9□□□□□ -0.97
TPM3-214ENST00000466010 CARD11Q9BXL7 1154 aa9□□□□□ -0.97
TPM3-214ENST00000466010 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
TPM3-214ENST00000466010 USP19O94966 1318 aa9□□□□□ -0.97
TPM3-214ENST00000466010 GLI3P10071 1580 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 USP6P35125 1406 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 BLMP54132 1417 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms