RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
GPNMB-206ENST00000465673 COL13A1Q5TAT6 717 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-206ENST00000465673 KLRG1Q96E93 195 aa14.09□□□□□ -0.15
GPNMB-206ENST00000465673 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
GPNMB-206ENST00000465673 ZBTB1Q9Y2K1 713 aa14.09□□□□□ -0.15
GPNMB-206ENST00000465673 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
GPNMB-206ENST00000465673 FSTL1Q12841 308 aa14.08□□□□□ -0.16
GPNMB-206ENST00000465673 SCN11AQ9UI33 1791 aa14.08□□□□□ -0.16
GPNMB-206ENST00000465673 SERPINB2P05120 415 aa14.07□□□□□ -0.16
GPNMB-206ENST00000465673 NARFQ9UHQ1 456 aa14.07□□□□□ -0.16
GPNMB-206ENST00000465673 KNSTRNQ9Y448 316 aa14.07□□□□□ -0.16
GPNMB-206ENST00000465673 SBF1O95248 1867 aa14.07□□□□□ -0.16
GPNMB-206ENST00000465673 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
GPNMB-206ENST00000465673 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
GPNMB-206ENST00000465673 BICDL1Q6ZP65 573 aa14.06□□□□□ -0.16
GPNMB-206ENST00000465673 COL15A1P39059 1388 aa14.06□□□□□ -0.16
GPNMB-206ENST00000465673 CARMIL3Q8ND23 1372 aa14.06□□□□□ -0.16
GPNMB-206ENST00000465673 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-206ENST00000465673 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
GPNMB-206ENST00000465673 CCDC24Q8N4L8 307 aa14.05□□□□□ -0.16
GPNMB-206ENST00000465673 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
GPNMB-206ENST00000465673 AFDNP55196 1824 aaKnown RBP14.05□□□□□ -0.16
GPNMB-206ENST00000465673 CAPN15O75808 1086 aa14.04□□□□□ -0.16
GPNMB-206ENST00000465673 NFKBIEO00221 500 aa14.03□□□□□ -0.16
GPNMB-206ENST00000465673 LMNB1P20700 586 aa14.03□□□□□ -0.16
GPNMB-206ENST00000465673 TTLL6Q8N841 843 aa14.03□□□□□ -0.16
GPNMB-206ENST00000465673 SMC1BQ8NDV3 1235 aa14.03□□□□□ -0.16
GPNMB-206ENST00000465673 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-206ENST00000465673 MRC1P22897 1456 aa14.02□□□□□ -0.16
GPNMB-206ENST00000465673 GLTPD2A6NH11 291 aa14.02□□□□□ -0.17
GPNMB-206ENST00000465673 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
GPNMB-206ENST00000465673 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
GPNMB-206ENST00000465673 TNRC6CQ9HCJ0 1690 aaKnown RBP14.01□□□□□ -0.17
GPNMB-206ENST00000465673 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
GPNMB-206ENST00000465673 POTECB2RU33 542 aa14.01□□□□□ -0.17
GPNMB-206ENST00000465673 H0YIN7 160 aa14.01□□□□□ -0.17
GPNMB-206ENST00000465673 VEGFAP15692 232 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-206ENST00000465673 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
GPNMB-206ENST00000465673 PCNTO95613 3336 aa14□□□□□ -0.17
GPNMB-206ENST00000465673 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
GPNMB-206ENST00000465673 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
GPNMB-206ENST00000465673 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
GPNMB-206ENST00000465673 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
GPNMB-206ENST00000465673 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
GPNMB-206ENST00000465673 ZNF330Q9Y3S2 320 aaPredicted RBP14□□□□□ -0.17
GPNMB-206ENST00000465673 C21orf2O43822 256 aa13.99□□□□□ -0.17
GPNMB-206ENST00000465673 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
GPNMB-206ENST00000465673 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
GPNMB-206ENST00000465673 IL17REQ8NFR9 667 aa13.99□□□□□ -0.17
GPNMB-206ENST00000465673 VIRMAQ69YN4 1812 aaKnown RBP13.99□□□□□ -0.17
GPNMB-206ENST00000465673 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
GPNMB-206ENST00000465673 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
GPNMB-206ENST00000465673 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
GPNMB-206ENST00000465673 STARD3NLO95772 234 aa13.98□□□□□ -0.17
GPNMB-206ENST00000465673 DLEC1Q9Y238 1755 aa13.98□□□□□ -0.17
GPNMB-206ENST00000465673 PER1O15534 1290 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-206ENST00000465673 KCNQ3O43525 872 aa13.97□□□□□ -0.17
GPNMB-206ENST00000465673 A1BGP04217 495 aa13.97□□□□□ -0.17
GPNMB-206ENST00000465673 PRR5LQ6MZQ0 368 aa13.97□□□□□ -0.17
GPNMB-206ENST00000465673 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
GPNMB-206ENST00000465673 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
GPNMB-206ENST00000465673 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 POTEJP0CG39 1038 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
GPNMB-206ENST00000465673 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
GPNMB-206ENST00000465673 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-206ENST00000465673 ERFEQ4G0M1 354 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
GPNMB-206ENST00000465673 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.18
GPNMB-206ENST00000465673 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
GPNMB-206ENST00000465673 A0A087WZG4 1122 aa13.95□□□□□ -0.18
GPNMB-206ENST00000465673 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
GPNMB-206ENST00000465673 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
GPNMB-206ENST00000465673 DDNO94850 711 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-206ENST00000465673 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-206ENST00000465673 PDE6BP35913 854 aa13.94□□□□□ -0.18
GPNMB-206ENST00000465673 TEFQ10587 303 aa13.94□□□□□ -0.18
GPNMB-206ENST00000465673 PRAMEF22A3QJZ6 481 aa13.93□□□□□ -0.18
GPNMB-206ENST00000465673 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
GPNMB-206ENST00000465673 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
GPNMB-206ENST00000465673 DPY19L2Q6NUT2 758 aa13.93□□□□□ -0.18
GPNMB-206ENST00000465673 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-206ENST00000465673 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
GPNMB-206ENST00000465673 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-206ENST00000465673 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
GPNMB-206ENST00000465673 MKRN1Q9UHC7 482 aaKnown RBP13.92□□□□□ -0.18
GPNMB-206ENST00000465673 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-206ENST00000465673 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
GPNMB-206ENST00000465673 CNBD1Q8NA66 436 aa13.91□□□□□ -0.18
GPNMB-206ENST00000465673 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
GPNMB-206ENST00000465673 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
GPNMB-206ENST00000465673 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
GPNMB-206ENST00000465673 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
GPNMB-206ENST00000465673 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
GPNMB-206ENST00000465673 NPHP1O15259 732 aa13.9□□□□□ -0.18
GPNMB-206ENST00000465673 SRGNP10124 158 aa13.9□□□□□ -0.18
GPNMB-206ENST00000465673 OLFM4Q6UX06 510 aa13.9□□□□□ -0.18
GPNMB-206ENST00000465673 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms