RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LBX1P52954 281 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 NFIXQ14938 502 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 CHADLQ6NUI6 762 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
HDAC6-214ENST00000465269 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 CNTNAP1P78357 1384 aa20.85■□□□□ 0.93
HDAC6-214ENST00000465269 TNNT2P45379 298 aaPredicted RBP20.84■□□□□ 0.93
HDAC6-214ENST00000465269 VEGFBP49765 207 aa20.84■□□□□ 0.93
HDAC6-214ENST00000465269 C2CD5Q86YS7 1000 aa20.84■□□□□ 0.93
HDAC6-214ENST00000465269 CTCFP49711 727 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-214ENST00000465269 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.93
HDAC6-214ENST00000465269 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
HDAC6-214ENST00000465269 ZPR1O75312 459 aa20.82■□□□□ 0.92
HDAC6-214ENST00000465269 DNAJC10Q8IXB1 793 aa20.82■□□□□ 0.92
HDAC6-214ENST00000465269 ABHD8Q96I13 439 aa20.82■□□□□ 0.92
HDAC6-214ENST00000465269 DDNO94850 711 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-214ENST00000465269 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
HDAC6-214ENST00000465269 AIDAQ96BJ3 306 aa20.81■□□□□ 0.92
HDAC6-214ENST00000465269 SERPINB2P05120 415 aa20.8■□□□□ 0.92
HDAC6-214ENST00000465269 ERFEQ4G0M1 354 aa20.8■□□□□ 0.92
HDAC6-214ENST00000465269 CCDC24Q8N4L8 307 aa20.8■□□□□ 0.92
HDAC6-214ENST00000465269 BCL2L12Q9HB09 334 aa20.8■□□□□ 0.92
HDAC6-214ENST00000465269 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-214ENST00000465269 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
HDAC6-214ENST00000465269 C21orf2O43822 256 aa20.79■□□□□ 0.92
HDAC6-214ENST00000465269 HSP90AB1P08238 724 aaKnown RBP20.79■□□□□ 0.92
HDAC6-214ENST00000465269 MTHFSP49914 203 aa20.79■□□□□ 0.92
HDAC6-214ENST00000465269 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-214ENST00000465269 AEBP1Q8IUX7 1158 aa20.78■□□□□ 0.92
HDAC6-214ENST00000465269 H0YIN7 160 aa20.77■□□□□ 0.92
HDAC6-214ENST00000465269 BICDL1Q6ZP65 573 aa20.77■□□□□ 0.92
HDAC6-214ENST00000465269 WBP1LQ9NX94 342 aa20.77■□□□□ 0.92
HDAC6-214ENST00000465269 PASKQ96RG2 1323 aa20.77■□□□□ 0.91
HDAC6-214ENST00000465269 HSPA8P11142 646 aaKnown RBP20.76■□□□□ 0.91
HDAC6-214ENST00000465269 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.911e-7■□□□□ 10.9
HDAC6-214ENST00000465269 NARFQ9UHQ1 456 aa20.75■□□□□ 0.91
HDAC6-214ENST00000465269 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
HDAC6-214ENST00000465269 DICER1Q9UPY3 1922 aaKnown RBP20.74■□□□□ 0.91
HDAC6-214ENST00000465269 COL15A1P39059 1388 aa20.73■□□□□ 0.91
HDAC6-214ENST00000465269 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
HDAC6-214ENST00000465269 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
HDAC6-214ENST00000465269 VIRMAQ69YN4 1812 aaKnown RBP20.73■□□□□ 0.91
HDAC6-214ENST00000465269 FER1L6Q2WGJ9 1857 aa20.73■□□□□ 0.91
HDAC6-214ENST00000465269 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
HDAC6-214ENST00000465269 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
HDAC6-214ENST00000465269 TNRC18O15417 2968 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-214ENST00000465269 CCDC85CA6NKD9 419 aa20.72■□□□□ 0.91
HDAC6-214ENST00000465269 SLC39A6Q13433 755 aa20.72■□□□□ 0.91
HDAC6-214ENST00000465269 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
HDAC6-214ENST00000465269 TMEM88BA6NKF7 163 aa20.71■□□□□ 0.91
HDAC6-214ENST00000465269 ITGBL1O95965 494 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-214ENST00000465269 EAPPQ56P03 285 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-214ENST00000465269 LDHDQ86WU2 507 aa20.7■□□□□ 0.9
HDAC6-214ENST00000465269 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-214ENST00000465269 MLLT1Q03111 559 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-214ENST00000465269 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
HDAC6-214ENST00000465269 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
HDAC6-214ENST00000465269 CANXP27824 592 aaKnown RBP20.68■□□□□ 0.9
HDAC6-214ENST00000465269 LGR6Q9HBX8 967 aa20.68■□□□□ 0.9
HDAC6-214ENST00000465269 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
HDAC6-214ENST00000465269 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
HDAC6-214ENST00000465269 CACNA1SQ13698 1873 aa20.67■□□□□ 0.9
HDAC6-214ENST00000465269 CLEC11AQ9Y240 323 aa20.66■□□□□ 0.9
HDAC6-214ENST00000465269 SCN11AQ9UI33 1791 aa20.66■□□□□ 0.9
HDAC6-214ENST00000465269 ZNF541Q9H0D2 1346 aa20.65■□□□□ 0.9
HDAC6-214ENST00000465269 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
HDAC6-214ENST00000465269 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-214ENST00000465269 PRR5LQ6MZQ0 368 aa20.65■□□□□ 0.9
HDAC6-214ENST00000465269 PCDH10Q9P2E7 1040 aa20.65■□□□□ 0.9
HDAC6-214ENST00000465269 WDR33Q9C0J8 1336 aaKnown RBP20.64■□□□□ 0.89
HDAC6-214ENST00000465269 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
HDAC6-214ENST00000465269 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
HDAC6-214ENST00000465269 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.89
HDAC6-214ENST00000465269 TSKSQ9UJT2 592 aa20.64■□□□□ 0.89
HDAC6-214ENST00000465269 LTBP3Q9NS15 1303 aa20.63■□□□□ 0.89
HDAC6-214ENST00000465269 IQCA1LA6NCM1 817 aa20.63■□□□□ 0.89
HDAC6-214ENST00000465269 RASSF10A6NK89 507 aa20.63■□□□□ 0.89
HDAC6-214ENST00000465269 FMR1Q06787 632 aaKnown RBP eCLIP20.63■□□□□ 0.89
HDAC6-214ENST00000465269 PRPF40BQ6NWY9 871 aaKnown RBP20.63■□□□□ 0.89
HDAC6-214ENST00000465269 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
HDAC6-214ENST00000465269 BRIP1Q9BX63 1249 aa20.63■□□□□ 0.89
HDAC6-214ENST00000465269 GRM1Q13255 1194 aa20.62■□□□□ 0.89
HDAC6-214ENST00000465269 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-214ENST00000465269 PDE6BP35913 854 aa20.61■□□□□ 0.89
HDAC6-214ENST00000465269 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
HDAC6-214ENST00000465269 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
HDAC6-214ENST00000465269 ABT1Q9ULW3 272 aaKnown RBP20.61■□□□□ 0.89
HDAC6-214ENST00000465269 SCN4AP35499 1836 aa20.6■□□□□ 0.89
HDAC6-214ENST00000465269 RGS19P49795 217 aa20.6■□□□□ 0.89
HDAC6-214ENST00000465269 TBC1D2BQ9UPU7 963 aa20.6■□□□□ 0.89
HDAC6-214ENST00000465269 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-214ENST00000465269 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
HDAC6-214ENST00000465269 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
HDAC6-214ENST00000465269 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
HDAC6-214ENST00000465269 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-214ENST00000465269 PDE4DIPQ5VU43 2346 aa20.59■□□□□ 0.89
HDAC6-214ENST00000465269 EPHX2P34913 555 aa20.58■□□□□ 0.89
HDAC6-214ENST00000465269 EIF5P55010 431 aaKnown RBP20.58■□□□□ 0.89
HDAC6-214ENST00000465269 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms