RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 POLRMTO00411 1230 aaKnown RBP29.07■■■□□ 2.24
EDEM1-205ENST00000465187 ARFGEF1Q9Y6D6 1849 aa29.07■■■□□ 2.24
EDEM1-205ENST00000465187 TM4SF1P30408 202 aa29.06■■■□□ 2.24
EDEM1-205ENST00000465187 ZNF496Q96IT1 587 aaPredicted RBP29.06■■■□□ 2.24
EDEM1-205ENST00000465187 BCL2L12Q9HB09 334 aa29.06■■■□□ 2.24
EDEM1-205ENST00000465187 GAS2L2Q8NHY3 880 aa29.05■■■□□ 2.24
EDEM1-205ENST00000465187 NRXN2Q9P2S2 1712 aa29.04■■■□□ 2.24
EDEM1-205ENST00000465187 KCNQ3O43525 872 aa29.04■■■□□ 2.24
EDEM1-205ENST00000465187 CANXP27824 592 aaKnown RBP29.04■■■□□ 2.24
EDEM1-205ENST00000465187 ZPR1O75312 459 aa29.03■■■□□ 2.24
EDEM1-205ENST00000465187 CHRNA5P30532 468 aa29.03■■■□□ 2.24
EDEM1-205ENST00000465187 CEMIPQ8WUJ3 1361 aa29.02■■■□□ 2.24
EDEM1-205ENST00000465187 FCHSD2O94868 740 aa29.02■■■□□ 2.24
EDEM1-205ENST00000465187 TEFQ10587 303 aa29.02■■■□□ 2.24
EDEM1-205ENST00000465187 VSIG10Q8N0Z9 540 aa29.02■■■□□ 2.24
EDEM1-205ENST00000465187 NFIXQ14938 502 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 ZNF790Q6PG37 636 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 TTC5Q8N0Z6 440 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 CFAP53Q96M91 514 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 GPBP1L1Q9HC44 474 aaPredicted RBP29.01■■■□□ 2.23
EDEM1-205ENST00000465187 NARFQ9UHQ1 456 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 HEG1Q9ULI3 1381 aa29.01■■■□□ 2.23
EDEM1-205ENST00000465187 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
EDEM1-205ENST00000465187 U2AF1L5P0DN76 240 aaPredicted RBP28.99■■■□□ 2.23
EDEM1-205ENST00000465187 U2AF1Q01081 240 aaKnown RBP eCLIP28.99■■■□□ 2.23
EDEM1-205ENST00000465187 ARHGAP27Q6ZUM4 889 aa28.99■■■□□ 2.23
EDEM1-205ENST00000465187 CARMIL3Q8ND23 1372 aa28.97■■■□□ 2.23
EDEM1-205ENST00000465187 DLG5Q8TDM6 1919 aa28.96■■■□□ 2.23
EDEM1-205ENST00000465187 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
EDEM1-205ENST00000465187 EIF5P55010 431 aaKnown RBP28.96■■■□□ 2.23
EDEM1-205ENST00000465187 MCM10Q7L590 875 aa28.96■■■□□ 2.23
EDEM1-205ENST00000465187 ANKRD31Q8N7Z5 1873 aa28.95■■■□□ 2.23
EDEM1-205ENST00000465187 PRAMEF22A3QJZ6 481 aa28.95■■■□□ 2.22
EDEM1-205ENST00000465187 DCTN1Q14203 1278 aa28.95■■■□□ 2.22
EDEM1-205ENST00000465187 BICDL1Q6ZP65 573 aa28.94■■■□□ 2.22
EDEM1-205ENST00000465187 PIM2Q9P1W9 311 aa28.94■■■□□ 2.22
EDEM1-205ENST00000465187 A1BGP04217 495 aa28.93■■■□□ 2.22
EDEM1-205ENST00000465187 PIP4K2AP48426 406 aaPredicted RBP28.93■■■□□ 2.22
EDEM1-205ENST00000465187 NUDCQ9Y266 331 aa28.93■■■□□ 2.22
EDEM1-205ENST00000465187 ZNF330Q9Y3S2 320 aaPredicted RBP28.93■■■□□ 2.22
EDEM1-205ENST00000465187 SBF1O95248 1867 aa28.93■■■□□ 2.22
EDEM1-205ENST00000465187 BTBD11A6QL63 1104 aa28.92■■■□□ 2.22
EDEM1-205ENST00000465187 STARD3NLO95772 234 aa28.92■■■□□ 2.22
EDEM1-205ENST00000465187 SERPINB2P05120 415 aa28.92■■■□□ 2.22
EDEM1-205ENST00000465187 BCORQ6W2J9 1755 aa28.91■■■□□ 2.22
EDEM1-205ENST00000465187 TBC1D2BQ9UPU7 963 aa28.91■■■□□ 2.22
EDEM1-205ENST00000465187 CEP350Q5VT06 3117 aa28.91■■■□□ 2.22
EDEM1-205ENST00000465187 KIF3CO14782 793 aa28.9■■■□□ 2.22
EDEM1-205ENST00000465187 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
EDEM1-205ENST00000465187 DALRD3Q5D0E6 543 aaKnown RBP28.9■■■□□ 2.22
EDEM1-205ENST00000465187 TBC1D9BQ66K14 1250 aa28.9■■■□□ 2.22
EDEM1-205ENST00000465187 FMNL2Q96PY5 1086 aa28.9■■■□□ 2.22
EDEM1-205ENST00000465187 COL11A2P13942 1736 aaPredicted RBP28.89■■■□□ 2.22
EDEM1-205ENST00000465187 CCDC24Q8N4L8 307 aa28.89■■■□□ 2.22
EDEM1-205ENST00000465187 USP16Q9Y5T5 823 aa28.89■■■□□ 2.22
EDEM1-205ENST00000465187 C9orf131Q5VYM1 1079 aa28.87■■■□□ 2.21
EDEM1-205ENST00000465187 TEX13AQ9BXU3 409 aaPredicted RBP28.84■■■□□ 2.21
EDEM1-205ENST00000465187 NMRK2Q9NPI5 230 aa28.84■■■□□ 2.21
EDEM1-205ENST00000465187 CACNA1SQ13698 1873 aa28.83■■■□□ 2.21
EDEM1-205ENST00000465187 CCDC88AQ3V6T2 1871 aa28.83■■■□□ 2.21
EDEM1-205ENST00000465187 CAMTA2O94983 1202 aa28.83■■■□□ 2.21
EDEM1-205ENST00000465187 IL6STP40189 918 aaPredicted RBP28.83■■■□□ 2.21
EDEM1-205ENST00000465187 RASSF7Q02833 373 aa28.83■■■□□ 2.21
EDEM1-205ENST00000465187 MIS18AQ9NYP9 233 aa28.83■■■□□ 2.21
EDEM1-205ENST00000465187 A0A087WZG4 1122 aa28.82■■■□□ 2.2
EDEM1-205ENST00000465187 PRELPP51888 382 aa28.82■■■□□ 2.2
EDEM1-205ENST00000465187 RTF1Q92541 710 aaKnown RBP28.82■■■□□ 2.2
EDEM1-205ENST00000465187 KDM3BQ7LBC6 1761 aa28.81■■■□□ 2.2
EDEM1-205ENST00000465187 C2CD5Q86YS7 1000 aa28.8■■■□□ 2.2
EDEM1-205ENST00000465187 RNF181Q9P0P0 153 aa28.8■■■□□ 2.2
EDEM1-205ENST00000465187 LAMB4A4D0S4 1761 aa28.8■■■□□ 2.2
EDEM1-205ENST00000465187 PLEKHF1Q96S99 279 aa28.79■■■□□ 2.2
EDEM1-205ENST00000465187 PRR5LQ6MZQ0 368 aa28.78■■■□□ 2.2
EDEM1-205ENST00000465187 THUMPD2Q9BTF0 503 aaKnown RBP28.78■■■□□ 2.2
EDEM1-205ENST00000465187 NBPF26B4DH59 902 aa28.77■■■□□ 2.2
EDEM1-205ENST00000465187 NBPF10Q6P3W6 841 aaKnown RBP28.77■■■□□ 2.2
EDEM1-205ENST00000465187 DZIP3Q86Y13 1208 aaKnown RBP28.77■■■□□ 2.2
EDEM1-205ENST00000465187 NBPF15Q8N660 670 aa28.77■■■□□ 2.2
EDEM1-205ENST00000465187 TIAM2Q8IVF5 1701 aa28.76■■■□□ 2.19
EDEM1-205ENST00000465187 SNRPA1P09661 255 aaKnown RBP28.74■■■□□ 2.19
EDEM1-205ENST00000465187 HSPA6P17066 643 aa28.74■■■□□ 2.19
EDEM1-205ENST00000465187 TTLL6Q8N841 843 aa28.74■■■□□ 2.19
EDEM1-205ENST00000465187 HTATSF1O43719 755 aaKnown RBP28.73■■■□□ 2.19
EDEM1-205ENST00000465187 TAF7Q15545 349 aaPredicted RBP28.73■■■□□ 2.19
EDEM1-205ENST00000465187 SLX4Q8IY92 1834 aa28.73■■■□□ 2.19
EDEM1-205ENST00000465187 H0YIN7 160 aa28.72■■■□□ 2.19
EDEM1-205ENST00000465187 ZNF219Q9P2Y4 722 aaPredicted RBP28.72■■■□□ 2.19
EDEM1-205ENST00000465187 FER1L6Q2WGJ9 1857 aa28.7■■■□□ 2.19
EDEM1-205ENST00000465187 NFKBIEO00221 500 aa28.7■■■□□ 2.18
EDEM1-205ENST00000465187 ZNF622Q969S3 477 aaKnown RBP eCLIP28.7■■■□□ 2.18
EDEM1-205ENST00000465187 SETDB2Q96T68 719 aa28.7■■■□□ 2.18
EDEM1-205ENST00000465187 BRIP1Q9BX63 1249 aa28.7■■■□□ 2.18
EDEM1-205ENST00000465187 TNRC6CQ9HCJ0 1690 aaKnown RBP28.7■■■□□ 2.18
EDEM1-205ENST00000465187 ARFGEF2Q9Y6D5 1785 aa28.68■■■□□ 2.18
EDEM1-205ENST00000465187 NFE2L2Q16236 605 aa28.68■■■□□ 2.18
EDEM1-205ENST00000465187 CNBD1Q8NA66 436 aa28.68■■■□□ 2.18
EDEM1-205ENST00000465187 NPM2Q86SE8 214 aaKnown RBP28.67■■■□□ 2.18
EDEM1-205ENST00000465187 C21orf2O43822 256 aa28.66■■■□□ 2.18
EDEM1-205ENST00000465187 HLFQ16534 295 aa28.66■■■□□ 2.18
EDEM1-205ENST00000465187 NUP98P52948 1817 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms