RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	NEFM	P07197	916 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	PRKAR2B	P31323	418 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	SIK1	P57059	783 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	MMRN1	Q13201	1228 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	SPNS2	Q8IVW8	549 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	ASAP1	Q9ULH1	1129 aa		10.14	□□□□□ -0.79
ITSN1-223	ENST00000465143	ATP6V1A	P38606	617 aa		10.13	□□□□□ -0.79
ITSN1-223	ENST00000465143	WDR43	Q15061	677 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
ITSN1-223	ENST00000465143	NFATC2IP	Q8NCF5	419 aa		10.13	□□□□□ -0.79
ITSN1-223	ENST00000465143	AK7	Q96M32	723 aa		10.13	□□□□□ -0.79
ITSN1-223	ENST00000465143	ATG3	Q9NT62	314 aa		10.13	□□□□□ -0.79
ITSN1-223	ENST00000465143	NHS	Q6T4R5	1651 aa		10.12	□□□□□ -0.79
ITSN1-223	ENST00000465143	FCHSD2	O94868	740 aa		10.12	□□□□□ -0.79
ITSN1-223	ENST00000465143	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.12	□□□□□ -0.79
ITSN1-223	ENST00000465143	MTFR1L	Q9H019	292 aa		10.12	□□□□□ -0.79
ITSN1-223	ENST00000465143	MAP2	P11137	1827 aa	Known RBP	10.12	□□□□□ -0.79
ITSN1-223	ENST00000465143	COL3A1	P02461	1466 aa	Predicted RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	KDM6A	O15550	1401 aa	Predicted RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	GNAT3	A8MTJ3	354 aa		10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	RNMT	O43148	476 aa	Known RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	PTCD1	O75127	700 aa	Known RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	MKRN3	Q13064	507 aa	Known RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	RTF1	Q92541	710 aa	Known RBP	10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	RSPH6A	Q9H0K4	717 aa		10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	SLC52A2	Q9HAB3	445 aa		10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	LGR6	Q9HBX8	967 aa		10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	ADAMTS8	Q9UP79	889 aa		10.11	□□□□□ -0.79
ITSN1-223	ENST00000465143	PHF14	O94880	888 aa		10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	VASP	P50552	380 aa	Predicted RBP	10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	TEF	Q10587	303 aa		10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	GSE1	Q14687	1217 aa		10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	PHACTR3	Q96KR7	559 aa		10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	PNN	Q9H307	717 aa	Known RBP	10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	MAP3K5	Q99683	1374 aa		10.1	□□□□□ -0.79
ITSN1-223	ENST00000465143	PNPLA7	Q6ZV29	1317 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	RGPD2	P0DJD1	1756 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	GNPAT	O15228	680 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	POLD1	P28340	1107 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	GOLGA2	Q08379	1002 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	LINC00116	Q8NCU8	138 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	FLAD1	Q8NFF5	587 aa		10.09	□□□□□ -0.79
ITSN1-223	ENST00000465143	MAPK8IP3	Q9UPT6	1336 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	PSEN1	P49768	467 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	ITPK1	Q13572	414 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	C3orf67	Q6ZVT6	689 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	TTC5	Q8N0Z6	440 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	SLC16A10	Q8TF71	515 aa		10.08	□□□□□ -0.8
ITSN1-223	ENST00000465143	RREB1	Q92766	1687 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	SENP3-EIF4A1	A0A087X0R7	540 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	SLC39A6	Q13433	755 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	COL23A1	Q86Y22	540 aa	Predicted RBP	10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	IL17RE	Q8NFR9	667 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	NUP188	Q5SRE5	1749 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	PKD1L3	Q7Z443	1732 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	DOT1L	Q8TEK3	1739 aa		10.07	□□□□□ -0.8
ITSN1-223	ENST00000465143	POTEB3	A0JP26	581 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	CENPB	P07199	599 aa	Predicted RBP	10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	CHRM1	P11229	460 aa	Predicted RBP	10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	SSFA2	P28290	1259 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	PTGER2	P43116	358 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	TRAPPC3L	Q5T215	181 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	DPY19L2	Q6NUT2	758 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	POTEB	Q6S5H4	581 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	CCDC146	Q8IYE0	955 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	ARX	Q96QS3	562 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	RTCB	Q9Y3I0	505 aa	Known RBP	10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	RGPD4	Q7Z3J3	1758 aa		10.06	□□□□□ -0.8
ITSN1-223	ENST00000465143	BTAF1	O14981	1849 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	SBF2	Q86WG5	1849 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	SHANK3	Q9BYB0	1731 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	BTBD11	A6QL63	1104 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	MSL1	Q68DK7	614 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	MCM10	Q7L590	875 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	SLC4A9	Q96Q91	983 aa		10.05	□□□□□ -0.8
ITSN1-223	ENST00000465143	HTATSF1	O43719	755 aa	Known RBP	10.04	□□□□□ -0.8
ITSN1-223	ENST00000465143	EMP3	P54852	163 aa		10.04	□□□□□ -0.8
ITSN1-223	ENST00000465143	SMIM5	Q71RC9	77 aa		10.04	□□□□□ -0.8
ITSN1-223	ENST00000465143	DNAJC10	Q8IXB1	793 aa		10.04	□□□□□ -0.8
ITSN1-223	ENST00000465143	CNTNAP4	Q9C0A0	1308 aa		10.04	□□□□□ -0.8
ITSN1-223	ENST00000465143	RFC4	P35249	363 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	CRKL	P46109	303 aa	Known RBP	10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	DCTN1	Q14203	1278 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	NFE2L2	Q16236	605 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	RC3H1	Q5TC82	1133 aa	Known RBP	10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	ZNF790	Q6PG37	636 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	AMIGO3	Q86WK7	504 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	RUNDC1	Q96C34	613 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	PLEKHF1	Q96S99	279 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	KAT6B	Q8WYB5	2073 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	ZBED9	Q6R2W3	1325 aa		10.03	□□□□□ -0.8
ITSN1-223	ENST00000465143	RPS6KA4	O75676	772 aa		10.02	□□□□□ -0.81
ITSN1-223	ENST00000465143	STARD3NL	O95772	234 aa		10.02	□□□□□ -0.81
ITSN1-223	ENST00000465143	VSIG10	Q8N0Z9	540 aa		10.02	□□□□□ -0.81
ITSN1-223	ENST00000465143	FMNL2	Q96PY5	1086 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms