RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ARHGAP27Q6ZUM4 889 aa23.08■■□□□ 1.29
CPSF4-209ENST00000465132 MRC1P22897 1456 aa23.08■■□□□ 1.29
CPSF4-209ENST00000465132 HSPA6P17066 643 aa23.07■■□□□ 1.28
CPSF4-209ENST00000465132 SLC39A6Q13433 755 aa23.06■■□□□ 1.28
CPSF4-209ENST00000465132 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
CPSF4-209ENST00000465132 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
CPSF4-209ENST00000465132 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
CPSF4-209ENST00000465132 ADAMTS7Q9UKP4 1686 aa23.04■■□□□ 1.28
CPSF4-209ENST00000465132 CYP19A1P11511 503 aaPredicted RBP23.04■■□□□ 1.28
CPSF4-209ENST00000465132 TM4SF1P30408 202 aa23.04■■□□□ 1.28
CPSF4-209ENST00000465132 MIER1Q8N108 512 aa23.04■■□□□ 1.28
CPSF4-209ENST00000465132 BRCA1P38398 1863 aaKnown RBP23.03■■□□□ 1.28
CPSF4-209ENST00000465132 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
CPSF4-209ENST00000465132 ZPR1O75312 459 aa23.03■■□□□ 1.28
CPSF4-209ENST00000465132 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
CPSF4-209ENST00000465132 KCPQ6ZWJ8 1503 aa23.03■■□□□ 1.28
CPSF4-209ENST00000465132 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
CPSF4-209ENST00000465132 VSIG10Q8N0Z9 540 aa23■■□□□ 1.27
CPSF4-209ENST00000465132 MAPK8IP3Q9UPT6 1336 aa23■■□□□ 1.27
CPSF4-209ENST00000465132 CHRNA5P30532 468 aa22.99■■□□□ 1.27
CPSF4-209ENST00000465132 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
CPSF4-209ENST00000465132 NARFQ9UHQ1 456 aa22.99■■□□□ 1.27
CPSF4-209ENST00000465132 ZBTB1Q9Y2K1 713 aa22.99■■□□□ 1.27
CPSF4-209ENST00000465132 COL15A1P39059 1388 aa22.99■■□□□ 1.27
CPSF4-209ENST00000465132 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
CPSF4-209ENST00000465132 C9orf131Q5VYM1 1079 aa22.98■■□□□ 1.27
CPSF4-209ENST00000465132 ARFGEF1Q9Y6D6 1849 aa22.97■■□□□ 1.27
CPSF4-209ENST00000465132 NFIXQ14938 502 aa22.97■■□□□ 1.27
CPSF4-209ENST00000465132 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
CPSF4-209ENST00000465132 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
CPSF4-209ENST00000465132 TOMM70O94826 608 aa22.95■■□□□ 1.26
CPSF4-209ENST00000465132 PRKAR2BP31323 418 aa22.95■■□□□ 1.26
CPSF4-209ENST00000465132 GAS2L2Q8NHY3 880 aa22.95■■□□□ 1.26
CPSF4-209ENST00000465132 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
CPSF4-209ENST00000465132 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
CPSF4-209ENST00000465132 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
CPSF4-209ENST00000465132 TTC5Q8N0Z6 440 aa22.94■■□□□ 1.26
CPSF4-209ENST00000465132 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
CPSF4-209ENST00000465132 CANXP27824 592 aaKnown RBP22.93■■□□□ 1.26
CPSF4-209ENST00000465132 CCDC184Q52MB2 194 aa22.93■■□□□ 1.26
CPSF4-209ENST00000465132 IL17REQ8NFR9 667 aa22.93■■□□□ 1.26
CPSF4-209ENST00000465132 UBR2Q8IWV8 1755 aa22.93■■□□□ 1.26
CPSF4-209ENST00000465132 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
CPSF4-209ENST00000465132 STARD3NLO95772 234 aa22.92■■□□□ 1.26
CPSF4-209ENST00000465132 FAM9BQ8IZU0 186 aa22.92■■□□□ 1.26
CPSF4-209ENST00000465132 SERPINB2P05120 415 aa22.91■■□□□ 1.26
CPSF4-209ENST00000465132 TEFQ10587 303 aa22.91■■□□□ 1.26
CPSF4-209ENST00000465132 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
CPSF4-209ENST00000465132 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
CPSF4-209ENST00000465132 APLP1P51693 650 aa22.9■■□□□ 1.26
CPSF4-209ENST00000465132 EIF5P55010 431 aaKnown RBP22.9■■□□□ 1.26
CPSF4-209ENST00000465132 ZNF790Q6PG37 636 aa22.9■■□□□ 1.26
CPSF4-209ENST00000465132 NRXN2Q9P2S2 1712 aa22.89■■□□□ 1.26
CPSF4-209ENST00000465132 NGEFQ8N5V2 710 aa22.89■■□□□ 1.25
CPSF4-209ENST00000465132 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.25
CPSF4-209ENST00000465132 AFDNP55196 1824 aaKnown RBP22.88■■□□□ 1.25
CPSF4-209ENST00000465132 A0A087WZG4 1122 aa22.88■■□□□ 1.25
CPSF4-209ENST00000465132 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-209ENST00000465132 KDM2BQ8NHM5 1336 aa22.87■■□□□ 1.25
CPSF4-209ENST00000465132 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
CPSF4-209ENST00000465132 RBM46Q8TBY0 533 aaKnown RBP22.87■■□□□ 1.25
CPSF4-209ENST00000465132 PLEKHF1Q96S99 279 aa22.87■■□□□ 1.25
CPSF4-209ENST00000465132 BICDL1Q6ZP65 573 aa22.86■■□□□ 1.25
CPSF4-209ENST00000465132 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
CPSF4-209ENST00000465132 HTATSF1O43719 755 aaKnown RBP22.85■■□□□ 1.25
CPSF4-209ENST00000465132 IFFO2Q5TF58 517 aa22.85■■□□□ 1.25
CPSF4-209ENST00000465132 C2CD5Q86YS7 1000 aa22.85■■□□□ 1.25
CPSF4-209ENST00000465132 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
CPSF4-209ENST00000465132 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
CPSF4-209ENST00000465132 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
CPSF4-209ENST00000465132 PHACTR3Q96KR7 559 aa22.85■■□□□ 1.25
CPSF4-209ENST00000465132 CARMIL3Q8ND23 1372 aa22.85■■□□□ 1.25
CPSF4-209ENST00000465132 RASSF7Q02833 373 aa22.84■■□□□ 1.25
CPSF4-209ENST00000465132 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
CPSF4-209ENST00000465132 FMNL2Q96PY5 1086 aa22.84■■□□□ 1.25
CPSF4-209ENST00000465132 SIPA1L3O60292 1781 aaPredicted RBP22.84■■□□□ 1.25
CPSF4-209ENST00000465132 H0YIN7 160 aa22.83■■□□□ 1.25
CPSF4-209ENST00000465132 NCBP3Q53F19 620 aaKnown RBP22.83■■□□□ 1.25
CPSF4-209ENST00000465132 TBC1D9BQ66K14 1250 aa22.83■■□□□ 1.25
CPSF4-209ENST00000465132 SBF1O95248 1867 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 DLEC1Q9Y238 1755 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 IL6STP40189 918 aaPredicted RBP22.82■■□□□ 1.24
CPSF4-209ENST00000465132 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 DNAJC5GQ8N7S2 189 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 RRAGCQ9HB90 399 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 TBC1D2BQ9UPU7 963 aa22.82■■□□□ 1.24
CPSF4-209ENST00000465132 ZNF330Q9Y3S2 320 aaPredicted RBP22.82■■□□□ 1.24
CPSF4-209ENST00000465132 ZC3H4Q9UPT8 1303 aaKnown RBP22.82■■□□□ 1.24
CPSF4-209ENST00000465132 LMNB1P20700 586 aa22.81■■□□□ 1.24
CPSF4-209ENST00000465132 BTBD11A6QL63 1104 aa22.8■■□□□ 1.24
CPSF4-209ENST00000465132 KCNQ3O43525 872 aa22.8■■□□□ 1.24
CPSF4-209ENST00000465132 A1BGP04217 495 aa22.8■■□□□ 1.24
CPSF4-209ENST00000465132 PRELPP51888 382 aa22.8■■□□□ 1.24
CPSF4-209ENST00000465132 FSTL1Q12841 308 aa22.8■■□□□ 1.24
CPSF4-209ENST00000465132 SCN7AQ01118 1682 aa22.79■■□□□ 1.24
CPSF4-209ENST00000465132 BRIP1Q9BX63 1249 aa22.79■■□□□ 1.24
CPSF4-209ENST00000465132 TMPOP42166 694 aaKnown RBP22.78■■□□□ 1.24
CPSF4-209ENST00000465132 RIPK4P57078 832 aa22.78■■□□□ 1.24
CPSF4-209ENST00000465132 CALD1Q05682 793 aaKnown RBP22.78■■□□□ 1.24
CPSF4-209ENST00000465132 PRR5LQ6MZQ0 368 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms