RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
HOXB3-204ENST00000465120 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
HOXB3-204ENST00000465120 DDR1Q08345 913 aa20.67■□□□□ 0.9
HOXB3-204ENST00000465120 PHACTR3Q96KR7 559 aa20.66■□□□□ 0.9
HOXB3-204ENST00000465120 COL15A1P39059 1388 aa20.66■□□□□ 0.9
HOXB3-204ENST00000465120 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
HOXB3-204ENST00000465120 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
HOXB3-204ENST00000465120 RSPH6AQ9H0K4 717 aa20.65■□□□□ 0.9
HOXB3-204ENST00000465120 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
HOXB3-204ENST00000465120 NARFQ9UHQ1 456 aa20.65■□□□□ 0.9
HOXB3-204ENST00000465120 ZNF330Q9Y3S2 320 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-204ENST00000465120 POLRMTO00411 1230 aaKnown RBP20.64■□□□□ 0.89
HOXB3-204ENST00000465120 TM4SF1P30408 202 aa20.64■□□□□ 0.89
HOXB3-204ENST00000465120 ZNF496Q96IT1 587 aaPredicted RBP20.64■□□□□ 0.89
HOXB3-204ENST00000465120 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
HOXB3-204ENST00000465120 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
HOXB3-204ENST00000465120 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
HOXB3-204ENST00000465120 TEX13AQ9BXU3 409 aaPredicted RBP20.63■□□□□ 0.89
HOXB3-204ENST00000465120 KIAA1551Q9HCM1 1747 aa20.63■□□□□ 0.89
HOXB3-204ENST00000465120 ADCY9O60503 1353 aa20.62■□□□□ 0.89
HOXB3-204ENST00000465120 KCNA3P22001 575 aa20.62■□□□□ 0.89
HOXB3-204ENST00000465120 CHRNA5P30532 468 aa20.62■□□□□ 0.89
HOXB3-204ENST00000465120 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
HOXB3-204ENST00000465120 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
HOXB3-204ENST00000465120 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
HOXB3-204ENST00000465120 A0A087WZG4 1122 aa20.61■□□□□ 0.89
HOXB3-204ENST00000465120 NFIXQ14938 502 aa20.61■□□□□ 0.89
HOXB3-204ENST00000465120 BICDL1Q6ZP65 573 aa20.61■□□□□ 0.89
HOXB3-204ENST00000465120 UBR2Q8IWV8 1755 aa20.6■□□□□ 0.89
HOXB3-204ENST00000465120 SERPINB2P05120 415 aa20.59■□□□□ 0.89
HOXB3-204ENST00000465120 NEFMP07197 916 aa20.58■□□□□ 0.89
HOXB3-204ENST00000465120 EIF5P55010 431 aaKnown RBP20.58■□□□□ 0.89
HOXB3-204ENST00000465120 MCM10Q7L590 875 aa20.58■□□□□ 0.89
HOXB3-204ENST00000465120 BCL2L12Q9HB09 334 aa20.58■□□□□ 0.89
HOXB3-204ENST00000465120 KCNQ3O43525 872 aa20.57■□□□□ 0.88
HOXB3-204ENST00000465120 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
HOXB3-204ENST00000465120 CEMIPQ8WUJ3 1361 aa20.57■□□□□ 0.88
HOXB3-204ENST00000465120 A1BGP04217 495 aa20.56■□□□□ 0.88
HOXB3-204ENST00000465120 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
HOXB3-204ENST00000465120 IL6STP40189 918 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-204ENST00000465120 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
HOXB3-204ENST00000465120 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
HOXB3-204ENST00000465120 C9orf131Q5VYM1 1079 aa20.54■□□□□ 0.88
HOXB3-204ENST00000465120 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
HOXB3-204ENST00000465120 NPHP1O15259 732 aa20.53■□□□□ 0.88
HOXB3-204ENST00000465120 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
HOXB3-204ENST00000465120 H0YIN7 160 aa20.52■□□□□ 0.88
HOXB3-204ENST00000465120 C2CD5Q86YS7 1000 aa20.52■□□□□ 0.88
HOXB3-204ENST00000465120 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
HOXB3-204ENST00000465120 ARFGEF1Q9Y6D6 1849 aa20.52■□□□□ 0.88
HOXB3-204ENST00000465120 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
HOXB3-204ENST00000465120 SNRPA1P09661 255 aaKnown RBP20.51■□□□□ 0.87
HOXB3-204ENST00000465120 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-204ENST00000465120 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
HOXB3-204ENST00000465120 KIF3CO14782 793 aa20.5■□□□□ 0.87
HOXB3-204ENST00000465120 DZIP3Q86Y13 1208 aaKnown RBP20.5■□□□□ 0.87
HOXB3-204ENST00000465120 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
HOXB3-204ENST00000465120 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
HOXB3-204ENST00000465120 CCDC24Q8N4L8 307 aa20.49■□□□□ 0.87
HOXB3-204ENST00000465120 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
HOXB3-204ENST00000465120 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
HOXB3-204ENST00000465120 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
HOXB3-204ENST00000465120 MIS18AQ9NYP9 233 aa20.48■□□□□ 0.87
HOXB3-204ENST00000465120 PDE6BP35913 854 aa20.47■□□□□ 0.87
HOXB3-204ENST00000465120 NRXN2Q9P2S2 1712 aa20.47■□□□□ 0.87
HOXB3-204ENST00000465120 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
HOXB3-204ENST00000465120 CAMTA2O94983 1202 aa20.46■□□□□ 0.87
HOXB3-204ENST00000465120 HSPA6P17066 643 aa20.46■□□□□ 0.87
HOXB3-204ENST00000465120 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
HOXB3-204ENST00000465120 NMRK2Q9NPI5 230 aa20.46■□□□□ 0.87
HOXB3-204ENST00000465120 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
HOXB3-204ENST00000465120 RASSF7Q02833 373 aa20.45■□□□□ 0.86
HOXB3-204ENST00000465120 PRR5LQ6MZQ0 368 aa20.45■□□□□ 0.86
HOXB3-204ENST00000465120 C16orf71Q8IYS4 520 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-204ENST00000465120 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
HOXB3-204ENST00000465120 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
HOXB3-204ENST00000465120 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
HOXB3-204ENST00000465120 TOMM70O94826 608 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 ST5P78524 1137 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 KDM2BQ8NHM5 1336 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 SCN7AQ01118 1682 aa20.44■□□□□ 0.86
HOXB3-204ENST00000465120 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
HOXB3-204ENST00000465120 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
HOXB3-204ENST00000465120 LMNB1P20700 586 aa20.41■□□□□ 0.86
HOXB3-204ENST00000465120 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
HOXB3-204ENST00000465120 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
HOXB3-204ENST00000465120 PLEKHF1Q96S99 279 aa20.41■□□□□ 0.86
HOXB3-204ENST00000465120 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 C21orf2O43822 256 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
HOXB3-204ENST00000465120 RALBP1Q15311 655 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
HOXB3-204ENST00000465120 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
HOXB3-204ENST00000465120 RRAGCQ9HB90 399 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 DLEC1Q9Y238 1755 aa20.4■□□□□ 0.86
HOXB3-204ENST00000465120 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms