RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 RRAGCQ9HB90 399 aa17.43■□□□□ 0.38
SLC13A3-208ENST00000464518 TJP1Q07157 1748 aa17.43■□□□□ 0.38
SLC13A3-208ENST00000464518 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 HTRA3P83110 453 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 DDR1Q08345 913 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 FKBP8Q14318 412 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 CHRDL2Q6WN34 429 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
SLC13A3-208ENST00000464518 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
SLC13A3-208ENST00000464518 TM4SF1P30408 202 aa17.4■□□□□ 0.38
SLC13A3-208ENST00000464518 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
SLC13A3-208ENST00000464518 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
SLC13A3-208ENST00000464518 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
SLC13A3-208ENST00000464518 LMNB1P20700 586 aa17.39■□□□□ 0.37
SLC13A3-208ENST00000464518 MTHFSP49914 203 aa17.39■□□□□ 0.37
SLC13A3-208ENST00000464518 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
SLC13A3-208ENST00000464518 PTCD1O75127 700 aaKnown RBP17.38■□□□□ 0.37
SLC13A3-208ENST00000464518 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
SLC13A3-208ENST00000464518 ZPR1O75312 459 aa17.37■□□□□ 0.37
SLC13A3-208ENST00000464518 CHRNA5P30532 468 aa17.37■□□□□ 0.37
SLC13A3-208ENST00000464518 SCN11AQ9UI33 1791 aa17.37■□□□□ 0.37
SLC13A3-208ENST00000464518 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
SLC13A3-208ENST00000464518 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
SLC13A3-208ENST00000464518 HSPA1AP0DMV8 641 aaKnown RBP17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 HSPA1BP0DMV9 641 aaKnown RBP17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 MRC1P22897 1456 aa17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
SLC13A3-208ENST00000464518 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
SLC13A3-208ENST00000464518 TTLL6Q8N841 843 aa17.33■□□□□ 0.36
SLC13A3-208ENST00000464518 NARFQ9UHQ1 456 aa17.33■□□□□ 0.36
SLC13A3-208ENST00000464518 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
SLC13A3-208ENST00000464518 COL15A1P39059 1388 aa17.32■□□□□ 0.36
SLC13A3-208ENST00000464518 RASSF7Q02833 373 aa17.32■□□□□ 0.36
SLC13A3-208ENST00000464518 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
SLC13A3-208ENST00000464518 DPY19L2Q6NUT2 758 aa17.32■□□□□ 0.36
SLC13A3-208ENST00000464518 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
SLC13A3-208ENST00000464518 NFIXQ14938 502 aa17.31■□□□□ 0.36
SLC13A3-208ENST00000464518 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
SLC13A3-208ENST00000464518 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
SLC13A3-208ENST00000464518 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
SLC13A3-208ENST00000464518 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
SLC13A3-208ENST00000464518 PCNTO95613 3336 aa17.29■□□□□ 0.36
SLC13A3-208ENST00000464518 SERPINB2P05120 415 aa17.29■□□□□ 0.36
SLC13A3-208ENST00000464518 CYP19A1P11511 503 aaPredicted RBP17.29■□□□□ 0.36
SLC13A3-208ENST00000464518 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
SLC13A3-208ENST00000464518 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
SLC13A3-208ENST00000464518 H0YIN7 160 aa17.28■□□□□ 0.36
SLC13A3-208ENST00000464518 NFKBIEO00221 500 aa17.28■□□□□ 0.36
SLC13A3-208ENST00000464518 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
SLC13A3-208ENST00000464518 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
SLC13A3-208ENST00000464518 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.36
SLC13A3-208ENST00000464518 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
SLC13A3-208ENST00000464518 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
SLC13A3-208ENST00000464518 POTECB2RU33 542 aa17.26■□□□□ 0.35
SLC13A3-208ENST00000464518 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
SLC13A3-208ENST00000464518 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
SLC13A3-208ENST00000464518 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
SLC13A3-208ENST00000464518 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
SLC13A3-208ENST00000464518 ZBTB1Q9Y2K1 713 aa17.25■□□□□ 0.35
SLC13A3-208ENST00000464518 PDE6BP35913 854 aa17.24■□□□□ 0.35
SLC13A3-208ENST00000464518 VIRMAQ69YN4 1812 aaKnown RBP17.24■□□□□ 0.35
SLC13A3-208ENST00000464518 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
SLC13A3-208ENST00000464518 A0A087WZG4 1122 aa17.23■□□□□ 0.35
SLC13A3-208ENST00000464518 IL13P35225 146 aa17.23■□□□□ 0.35
SLC13A3-208ENST00000464518 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
SLC13A3-208ENST00000464518 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
SLC13A3-208ENST00000464518 ANKRD31Q8N7Z5 1873 aa17.21■□□□□ 0.35
SLC13A3-208ENST00000464518 CNTNAP1P78357 1384 aa17.21■□□□□ 0.35
SLC13A3-208ENST00000464518 STARD3NLO95772 234 aa17.21■□□□□ 0.35
SLC13A3-208ENST00000464518 PANK3Q9H999 370 aa17.21■□□□□ 0.35
SLC13A3-208ENST00000464518 ARFGEF2Q9Y6D5 1785 aa17.2■□□□□ 0.34
SLC13A3-208ENST00000464518 IQCA1LA6NCM1 817 aa17.2■□□□□ 0.34
SLC13A3-208ENST00000464518 EIF5P55010 431 aaKnown RBP17.2■□□□□ 0.34
SLC13A3-208ENST00000464518 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
SLC13A3-208ENST00000464518 SCN4AP35499 1836 aa17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 COL11A2P13942 1736 aaPredicted RBP17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 TAOK3Q9H2K8 898 aa17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
SLC13A3-208ENST00000464518 CNKSR1Q969H4 720 aa17.18■□□□□ 0.34
SLC13A3-208ENST00000464518 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
SLC13A3-208ENST00000464518 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
SLC13A3-208ENST00000464518 C21orf2O43822 256 aa17.17■□□□□ 0.34
SLC13A3-208ENST00000464518 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
SLC13A3-208ENST00000464518 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
SLC13A3-208ENST00000464518 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
SLC13A3-208ENST00000464518 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
SLC13A3-208ENST00000464518 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
SLC13A3-208ENST00000464518 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms