RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
PDLIM2-216ENST00000464275 LRRFIP2Q9Y608 721 aaKnown RBP26.98■■□□□ 1.91
PDLIM2-216ENST00000464275 IL2RBP14784 551 aa26.98■■□□□ 1.91
PDLIM2-216ENST00000464275 CABP4P57796 275 aa26.98■■□□□ 1.91
PDLIM2-216ENST00000464275 EVA1CP58658 441 aa26.98■■□□□ 1.91
PDLIM2-216ENST00000464275 TTC5Q8N0Z6 440 aa26.98■■□□□ 1.91
PDLIM2-216ENST00000464275 PROSER3Q2NL68 480 aa26.97■■□□□ 1.91
PDLIM2-216ENST00000464275 KSR2Q6VAB6 950 aa26.97■■□□□ 1.91
PDLIM2-216ENST00000464275 UBR2Q8IWV8 1755 aa26.97■■□□□ 1.91
PDLIM2-216ENST00000464275 LTBP4Q8N2S1 1624 aa26.96■■□□□ 1.91
PDLIM2-216ENST00000464275 STRN4Q9NRL3 753 aa26.96■■□□□ 1.91
PDLIM2-216ENST00000464275 LARP1Q6PKG0 1096 aaKnown RBP26.95■■□□□ 1.9
PDLIM2-216ENST00000464275 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.9
PDLIM2-216ENST00000464275 PAPPAQ13219 1627 aa26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 ALDH1L1O75891 902 aa26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 DDX58O95786 925 aaKnown RBP26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 SNRPA1P09661 255 aaKnown RBP26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 MFAP1P55081 439 aaKnown RBP26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 PDIA6Q15084 440 aa26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 FMNL2Q96PY5 1086 aa26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 MAP3K2Q9Y2U5 619 aa26.94■■□□□ 1.9
PDLIM2-216ENST00000464275 PNMA6EA0A0J9YXQ4 647 aa26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 C16orf71Q8IYS4 520 aaPredicted RBP26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 GLI3P10071 1580 aa26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 SMARCA5O60264 1052 aaPredicted RBP26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 TTC22Q5TAA0 569 aa26.93■■□□□ 1.9
PDLIM2-216ENST00000464275 ERVV-2B6SEH9 535 aa26.92■■□□□ 1.9
PDLIM2-216ENST00000464275 APBB1O00213 710 aa26.91■■□□□ 1.9
PDLIM2-216ENST00000464275 C22orf23Q9BZE7 217 aa26.91■■□□□ 1.9
PDLIM2-216ENST00000464275 SSH3Q8TE77 659 aa26.91■■□□□ 1.9
PDLIM2-216ENST00000464275 TUBGCP6Q96RT7 1819 aa26.9■■□□□ 1.9
PDLIM2-216ENST00000464275 EXOC6BQ9Y2D4 811 aa26.9■■□□□ 1.9
PDLIM2-216ENST00000464275 IBTKQ9P2D0 1353 aaPredicted RBP26.9■■□□□ 1.9
PDLIM2-216ENST00000464275 GSPT1P15170 499 aaKnown RBP26.89■■□□□ 1.9
PDLIM2-216ENST00000464275 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.9
PDLIM2-216ENST00000464275 BECN1Q14457 450 aa26.89■■□□□ 1.89
PDLIM2-216ENST00000464275 HDAC5Q9UQL6 1122 aa26.89■■□□□ 1.89
PDLIM2-216ENST00000464275 CDC45O75419 566 aa26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 NBPF7P0C2Y1 421 aaPredicted RBP26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 LRRCC1Q9C099 1032 aa26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 POLA2Q14181 598 aa26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 OTUD7AQ8TE49 926 aaPredicted RBP26.88■■□□□ 1.89
PDLIM2-216ENST00000464275 TOGARAM1Q9Y4F4 1720 aa26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 PLCH1Q4KWH8 1693 aa26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 PHLPP1O60346 1717 aa26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 EIF5BO60841 1220 aaKnown RBP26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 LINS1Q8NG48 757 aa26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 WNK3Q9BYP7 1800 aa26.87■■□□□ 1.89
PDLIM2-216ENST00000464275 SLC4A3P48751 1232 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 TBC1D9Q6ZT07 1266 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 PPP1R42Q7Z4L9 355 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 OSBPL3Q9H4L5 887 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 BTG4Q9NY30 223 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 USP16Q9Y5T5 823 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 ARFGEF2Q9Y6D5 1785 aa26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 AIMP1Q12904 312 aaKnown RBP26.86■■□□□ 1.89
PDLIM2-216ENST00000464275 NFKBIBQ15653 356 aa26.85■■□□□ 1.89
PDLIM2-216ENST00000464275 C9orf78Q9NZ63 289 aaPredicted RBP26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 RAB11FIP3O75154 756 aa26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 MYL6BP14649 208 aa26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 RIC3Q7Z5B4 369 aa26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 DDX54Q8TDD1 881 aaKnown RBP26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 ITGB4P16144 1822 aa26.84■■□□□ 1.89
PDLIM2-216ENST00000464275 KCPQ6ZWJ8 1503 aa26.83■■□□□ 1.88
PDLIM2-216ENST00000464275 XAGE3Q8WTP9 111 aa26.82■■□□□ 1.88
PDLIM2-216ENST00000464275 ERBB4Q15303 1308 aa26.82■■□□□ 1.88
PDLIM2-216ENST00000464275 RBM25P49756 843 aaKnown RBP26.82■■□□□ 1.88
PDLIM2-216ENST00000464275 UTYO14607 1347 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 SALL3Q9BXA9 1300 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 SRGAP3O43295 1099 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 PDE1AP54750 535 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 MTX1Q13505 466 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 COPS6Q7L5N1 327 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 LRP10Q7Z4F1 713 aa26.81■■□□□ 1.88
PDLIM2-216ENST00000464275 NEXNQ0ZGT2 675 aa26.8■■□□□ 1.88
PDLIM2-216ENST00000464275 CWF19L2Q2TBE0 894 aaKnown RBP26.8■■□□□ 1.88
PDLIM2-216ENST00000464275 AK9Q5TCS8 1911 aa26.79■■□□□ 1.88
PDLIM2-216ENST00000464275 GRM8O00222 908 aa26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 SURF6O75683 361 aaKnown RBP26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 METTL22Q9BUU2 404 aaPredicted RBP26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 DISP2A7MBM2 1401 aa26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 SDSP20132 328 aa26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 HSP90AB4PQ58FF6 505 aa26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 TNS2Q63HR2 1409 aa26.78■■□□□ 1.88
PDLIM2-216ENST00000464275 ANKRD13DQ6ZTN6 518 aa26.77■■□□□ 1.88
PDLIM2-216ENST00000464275 NUP188Q5SRE5 1749 aa26.76■■□□□ 1.87
PDLIM2-216ENST00000464275 IGKV5-2P06315 115 aa26.76■■□□□ 1.87
PDLIM2-216ENST00000464275 MX1P20591 662 aa26.76■■□□□ 1.87
PDLIM2-216ENST00000464275 CASC1Q6TDU7 716 aa26.75■■□□□ 1.87
PDLIM2-216ENST00000464275 STAP2Q9UGK3 403 aa26.75■■□□□ 1.87
PDLIM2-216ENST00000464275 NRAPQ86VF7 1730 aa26.75■■□□□ 1.87
PDLIM2-216ENST00000464275 NEURL1BA8MQ27 555 aa26.75■■□□□ 1.87
PDLIM2-216ENST00000464275 KIF1BPQ96EK5 621 aa26.75■■□□□ 1.87
PDLIM2-216ENST00000464275 AOX1Q06278 1338 aa26.74■■□□□ 1.87
PDLIM2-216ENST00000464275 RHPN1Q8TCX5 695 aa26.74■■□□□ 1.87
PDLIM2-216ENST00000464275 MYD88Q99836 296 aa26.74■■□□□ 1.87
PDLIM2-216ENST00000464275 LRP6O75581 1613 aa26.73■■□□□ 1.87
PDLIM2-216ENST00000464275 TMOD3Q9NYL9 352 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms