RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
TMEM54-203ENST00000463914 COL15A1P39059 1388 aa13.95□□□□□ -0.18
TMEM54-203ENST00000463914 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
TMEM54-203ENST00000463914 ZBTB1Q9Y2K1 713 aa13.94□□□□□ -0.18
TMEM54-203ENST00000463914 TIAM2Q8IVF5 1701 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 ZPR1O75312 459 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
TMEM54-203ENST00000463914 TM4SF1P30408 202 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 NFIXQ14938 502 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 SCN7AQ01118 1682 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 CARMIL3Q8ND23 1372 aa13.93□□□□□ -0.18
TMEM54-203ENST00000463914 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 HTRA3P83110 453 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 RASSF7Q02833 373 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 MTHFSDQ2M296 383 aaKnown RBP13.92□□□□□ -0.18
TMEM54-203ENST00000463914 RBM46Q8TBY0 533 aaKnown RBP13.92□□□□□ -0.18
TMEM54-203ENST00000463914 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 CCDC88AQ3V6T2 1871 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 ANKRD31Q8N7Z5 1873 aa13.92□□□□□ -0.18
TMEM54-203ENST00000463914 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
TMEM54-203ENST00000463914 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
TMEM54-203ENST00000463914 COL11A2P13942 1736 aaPredicted RBP13.91□□□□□ -0.18
TMEM54-203ENST00000463914 DNAJC5GQ8N7S2 189 aa13.91□□□□□ -0.18
TMEM54-203ENST00000463914 NARFQ9UHQ1 456 aa13.91□□□□□ -0.18
TMEM54-203ENST00000463914 KDM2BQ8NHM5 1336 aa13.9□□□□□ -0.18
TMEM54-203ENST00000463914 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
TMEM54-203ENST00000463914 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
TMEM54-203ENST00000463914 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
TMEM54-203ENST00000463914 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
TMEM54-203ENST00000463914 SERPINB2P05120 415 aa13.88□□□□□ -0.19
TMEM54-203ENST00000463914 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
TMEM54-203ENST00000463914 PRELPP51888 382 aa13.88□□□□□ -0.19
TMEM54-203ENST00000463914 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
TMEM54-203ENST00000463914 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
TMEM54-203ENST00000463914 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
TMEM54-203ENST00000463914 FSTL1Q12841 308 aa13.86□□□□□ -0.19
TMEM54-203ENST00000463914 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
TMEM54-203ENST00000463914 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
TMEM54-203ENST00000463914 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
TMEM54-203ENST00000463914 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
TMEM54-203ENST00000463914 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
TMEM54-203ENST00000463914 NFKBIEO00221 500 aa13.85□□□□□ -0.19
TMEM54-203ENST00000463914 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
TMEM54-203ENST00000463914 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
TMEM54-203ENST00000463914 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
TMEM54-203ENST00000463914 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
TMEM54-203ENST00000463914 HEG1Q9ULI3 1381 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
TMEM54-203ENST00000463914 LMNB1P20700 586 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 CCDC24Q8N4L8 307 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
TMEM54-203ENST00000463914 FER1L6Q2WGJ9 1857 aa13.84□□□□□ -0.19
TMEM54-203ENST00000463914 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
TMEM54-203ENST00000463914 SMC1BQ8NDV3 1235 aa13.83□□□□□ -0.2
TMEM54-203ENST00000463914 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
TMEM54-203ENST00000463914 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
TMEM54-203ENST00000463914 STARD3NLO95772 234 aa13.82□□□□□ -0.2
TMEM54-203ENST00000463914 TEFQ10587 303 aa13.82□□□□□ -0.2
TMEM54-203ENST00000463914 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
TMEM54-203ENST00000463914 SLX4Q8IY92 1834 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 H0YIN7 160 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
TMEM54-203ENST00000463914 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
TMEM54-203ENST00000463914 A0A087WZG4 1122 aa13.8□□□□□ -0.2
TMEM54-203ENST00000463914 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
TMEM54-203ENST00000463914 KCNQ3O43525 872 aa13.8□□□□□ -0.2
TMEM54-203ENST00000463914 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
TMEM54-203ENST00000463914 PRR5LQ6MZQ0 368 aa13.8□□□□□ -0.2
TMEM54-203ENST00000463914 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMEM54-203ENST00000463914 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
TMEM54-203ENST00000463914 A1BGP04217 495 aa13.79□□□□□ -0.2
TMEM54-203ENST00000463914 C21orf2O43822 256 aa13.78□□□□□ -0.2
TMEM54-203ENST00000463914 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
TMEM54-203ENST00000463914 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
TMEM54-203ENST00000463914 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-203ENST00000463914 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-203ENST00000463914 COL13A1Q5TAT6 717 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-203ENST00000463914 FMNL2Q96PY5 1086 aa13.78□□□□□ -0.2
TMEM54-203ENST00000463914 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
TMEM54-203ENST00000463914 POTECB2RU33 542 aa13.77□□□□□ -0.21
TMEM54-203ENST00000463914 CNBD1Q8NA66 436 aa13.77□□□□□ -0.21
TMEM54-203ENST00000463914 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
TMEM54-203ENST00000463914 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
TMEM54-203ENST00000463914 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
TMEM54-203ENST00000463914 PDE6BP35913 854 aa13.76□□□□□ -0.21
TMEM54-203ENST00000463914 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
TMEM54-203ENST00000463914 NPHP1O15259 732 aa13.75□□□□□ -0.21
TMEM54-203ENST00000463914 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
TMEM54-203ENST00000463914 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
TMEM54-203ENST00000463914 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
TMEM54-203ENST00000463914 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
TMEM54-203ENST00000463914 LTBP3Q9NS15 1303 aa13.74□□□□□ -0.21
TMEM54-203ENST00000463914 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms