RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 GCC1Q96CN9 775 aa9.77□□□□□ -0.85
GTDC1-212ENST00000463875 TAF1DQ9H5J8 278 aaPredicted RBP9.77□□□□□ -0.85
GTDC1-212ENST00000463875 DDNO94850 711 aaPredicted RBP9.76□□□□□ -0.85
GTDC1-212ENST00000463875 MAP2K2P36507 400 aa9.76□□□□□ -0.85
GTDC1-212ENST00000463875 PNMA8AQ86V59 439 aaPredicted RBP9.76□□□□□ -0.85
GTDC1-212ENST00000463875 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
GTDC1-212ENST00000463875 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
GTDC1-212ENST00000463875 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
GTDC1-212ENST00000463875 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
GTDC1-212ENST00000463875 THSD7BQ9C0I4 1608 aa9.76□□□□□ -0.85
GTDC1-212ENST00000463875 SCN4AP35499 1836 aa9.76□□□□□ -0.85
GTDC1-212ENST00000463875 H0YIN7 160 aa9.75□□□□□ -0.85
GTDC1-212ENST00000463875 GPR101Q96P66 508 aaPredicted RBP9.75□□□□□ -0.85
GTDC1-212ENST00000463875 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
GTDC1-212ENST00000463875 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
GTDC1-212ENST00000463875 DICER1Q9UPY3 1922 aaKnown RBP9.75□□□□□ -0.85
GTDC1-212ENST00000463875 COL5A3P25940 1745 aaPredicted RBP9.75□□□□□ -0.85
GTDC1-212ENST00000463875 ERVV-2B6SEH9 535 aa9.75□□□□□ -0.85
GTDC1-212ENST00000463875 ROCK2O75116 1388 aaKnown RBP9.74□□□□□ -0.85
GTDC1-212ENST00000463875 FLT4P35916 1363 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 DLEC1Q9Y238 1755 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 ZPR1O75312 459 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 FBLN1P23142 703 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 DGKZQ13574 1117 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
GTDC1-212ENST00000463875 CNTROBQ8N137 903 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 CAPNS2Q96L46 248 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 SRP68Q9UHB9 627 aaKnown RBP9.74□□□□□ -0.85
GTDC1-212ENST00000463875 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
GTDC1-212ENST00000463875 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 PHKG2P15735 406 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
GTDC1-212ENST00000463875 EAPPQ56P03 285 aaPredicted RBP9.73□□□□□ -0.85
GTDC1-212ENST00000463875 HSP90AB2PQ58FF8 381 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 SOGA3Q5TF21 947 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 HACL1Q9UJ83 578 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
GTDC1-212ENST00000463875 DDX21Q9NR30 783 aaKnown RBP eCLIP9.72□□□□□ -0.85
GTDC1-212ENST00000463875 TNRC18O15417 2968 aaPredicted RBP9.71□□□□□ -0.85
GTDC1-212ENST00000463875 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.85
GTDC1-212ENST00000463875 EPHX2P34913 555 aa9.71□□□□□ -0.85
GTDC1-212ENST00000463875 MYH14Q7Z406 1995 aaKnown RBP9.71□□□□□ -0.86
GTDC1-212ENST00000463875 SERPINB2P05120 415 aa9.71□□□□□ -0.86
GTDC1-212ENST00000463875 NFIXQ14938 502 aa9.71□□□□□ -0.86
GTDC1-212ENST00000463875 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
GTDC1-212ENST00000463875 NRXN2Q9P2S2 1712 aa9.71□□□□□ -0.86
GTDC1-212ENST00000463875 ADAMTSL1Q8N6G6 1762 aa9.71□□□□□ -0.86
GTDC1-212ENST00000463875 FER1L6Q2WGJ9 1857 aa9.7□□□□□ -0.86
GTDC1-212ENST00000463875 C21orf2O43822 256 aa9.7□□□□□ -0.86
GTDC1-212ENST00000463875 PDE6BP35913 854 aa9.7□□□□□ -0.86
GTDC1-212ENST00000463875 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
GTDC1-212ENST00000463875 USPL1Q5W0Q7 1092 aa9.7□□□□□ -0.86
GTDC1-212ENST00000463875 MAP1SQ66K74 1059 aaPredicted RBP9.7□□□□□ -0.86
GTDC1-212ENST00000463875 CYP4F22Q6NT55 531 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 HHIPL1Q96JK4 782 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
GTDC1-212ENST00000463875 NARFQ9UHQ1 456 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 LTBP1Q14766 1721 aa9.69□□□□□ -0.86
GTDC1-212ENST00000463875 FYB1O15117 783 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 L3MBTL2Q969R5 705 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 ZNF622Q969S3 477 aaKnown RBP eCLIP9.68□□□□□ -0.867e-6■■□□□ 12.8
GTDC1-212ENST00000463875 BRIP1Q9BX63 1249 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 TSKSQ9UJT2 592 aa9.68□□□□□ -0.86
GTDC1-212ENST00000463875 SOX10P56693 466 aa9.67□□□□□ -0.86
GTDC1-212ENST00000463875 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
GTDC1-212ENST00000463875 AFDNP55196 1824 aaKnown RBP9.67□□□□□ -0.86
GTDC1-212ENST00000463875 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
GTDC1-212ENST00000463875 CABP4P57796 275 aa9.67□□□□□ -0.86
GTDC1-212ENST00000463875 GRM1Q13255 1194 aa9.67□□□□□ -0.86
GTDC1-212ENST00000463875 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
GTDC1-212ENST00000463875 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
GTDC1-212ENST00000463875 CASP8AP2Q9UKL3 1982 aa9.66□□□□□ -0.86
GTDC1-212ENST00000463875 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
GTDC1-212ENST00000463875 HABP4Q5JVS0 413 aaKnown RBP9.66□□□□□ -0.86
GTDC1-212ENST00000463875 GPC2Q8N158 579 aa9.66□□□□□ -0.86
GTDC1-212ENST00000463875 STYK1Q6J9G0 422 aa9.65□□□□□ -0.86
GTDC1-212ENST00000463875 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
GTDC1-212ENST00000463875 AOC2O75106 756 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 CST9Q5W186 159 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 SAPCD2Q86UD0 394 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 EYA1Q99502 592 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 WASHC2AQ641Q2 1341 aa9.64□□□□□ -0.87
GTDC1-212ENST00000463875 FZD9O00144 591 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 NOGQ13253 232 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 CCDC93Q567U6 631 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
GTDC1-212ENST00000463875 SAGE1Q9NXZ1 904 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 COL15A1P39059 1388 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 ZNF541Q9H0D2 1346 aa9.63□□□□□ -0.87
GTDC1-212ENST00000463875 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
GTDC1-212ENST00000463875 FKBP4Q02790 459 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTDC1-212ENST00000463875 USP50Q70EL3 339 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms