RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 SWI5Q1ZZU3 235 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 GAS2L1Q99501 681 aaPredicted RBP7.92□□□□□ -1.14
USP9X-204ENST00000463829 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 ETNK1Q9HBU6 452 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 ARHGEF10LQ9HCE6 1279 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 DYRK1BQ9Y463 629 aa7.92□□□□□ -1.14
USP9X-204ENST00000463829 STAU1O95793 577 aaKnown RBP7.91□□□□□ -1.14
USP9X-204ENST00000463829 POU4F2Q12837 409 aa7.91□□□□□ -1.14
USP9X-204ENST00000463829 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
USP9X-204ENST00000463829 RAB6BQ9NRW1 208 aa7.91□□□□□ -1.14
USP9X-204ENST00000463829 MBIPQ9NS73 344 aa7.91□□□□□ -1.14
USP9X-204ENST00000463829 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
USP9X-204ENST00000463829 CELA2BP08218 269 aaPredicted RBP7.9□□□□□ -1.14
USP9X-204ENST00000463829 FAM69CQ0P6D2 419 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 CLN3Q13286 438 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 ZNF837Q96EG3 531 aaPredicted RBP7.9□□□□□ -1.14
USP9X-204ENST00000463829 SLC4A9Q96Q91 983 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 HINFPQ9BQA5 517 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 ESYT1Q9BSJ8 1104 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 SERTAD1Q9UHV2 236 aa7.9□□□□□ -1.14
USP9X-204ENST00000463829 NSFL1CQ9UNZ2 370 aaKnown RBP7.9□□□□□ -1.14
USP9X-204ENST00000463829 CARNS1A5YM72 827 aa7.89□□□□□ -1.15
USP9X-204ENST00000463829 IL2RAP01589 272 aa7.89□□□□□ -1.15
USP9X-204ENST00000463829 GAS6Q14393 721 aa7.89□□□□□ -1.15
USP9X-204ENST00000463829 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
USP9X-204ENST00000463829 CLP1Q92989 425 aaKnown RBP7.89□□□□□ -1.15
USP9X-204ENST00000463829 DNMT3AQ9Y6K1 912 aaPredicted RBP7.89□□□□□ -1.15
USP9X-204ENST00000463829 PHF20L1A8MW92 1017 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 GPR25O00155 361 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 IGHA1P01876 353 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
USP9X-204ENST00000463829 FOXK2Q01167 660 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 DBN1Q16643 649 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 WDR44Q5JSH3 913 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
USP9X-204ENST00000463829 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 TSEN2Q8NCE0 465 aaKnown RBP7.88□□□□□ -1.15
USP9X-204ENST00000463829 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 GTPBP3Q969Y2 492 aaKnown RBP7.88□□□□□ -1.15
USP9X-204ENST00000463829 GRIP2Q9C0E4 1043 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
USP9X-204ENST00000463829 IGF1RP08069 1367 aa7.87□□□□□ -1.15
USP9X-204ENST00000463829 SMTNP53814 917 aa7.87□□□□□ -1.15
USP9X-204ENST00000463829 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
USP9X-204ENST00000463829 PODNQ7Z5L7 613 aa7.87□□□□□ -1.15
USP9X-204ENST00000463829 HRH3Q9Y5N1 445 aa7.87□□□□□ -1.15
USP9X-204ENST00000463829 A6NJY4 79 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 F11P03951 625 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 CENPCQ03188 943 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 TLR1Q15399 786 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 B4GALNT3Q6L9W6 998 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 GPAT2Q6NUI2 795 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 TNS4Q8IZW8 715 aa7.86□□□□□ -1.15
USP9X-204ENST00000463829 BRD1O95696 1058 aa7.85□□□□□ -1.15
USP9X-204ENST00000463829 BCRP11274 1271 aa7.85□□□□□ -1.15
USP9X-204ENST00000463829 MX2P20592 715 aa7.85□□□□□ -1.15
USP9X-204ENST00000463829 EPHA4P54764 986 aa7.85□□□□□ -1.15
USP9X-204ENST00000463829 MTFR1Q15390 333 aa7.85□□□□□ -1.15
USP9X-204ENST00000463829 BEND7Q8N7W2 519 aaPredicted RBP7.85□□□□□ -1.15
USP9X-204ENST00000463829 NUCKS1Q9H1E3 243 aaKnown RBP7.85□□□□□ -1.15
USP9X-204ENST00000463829 SCHIP1Q9P0W5 487 aaPredicted RBP7.85□□□□□ -1.15
USP9X-204ENST00000463829 CDK2AP1O14519 115 aa7.84□□□□□ -1.15
USP9X-204ENST00000463829 PRMT3O60678 531 aa7.84□□□□□ -1.15
USP9X-204ENST00000463829 WEE1P30291 646 aa7.84□□□□□ -1.15
USP9X-204ENST00000463829 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
USP9X-204ENST00000463829 FHDC1Q9C0D6 1143 aaPredicted RBP7.84□□□□□ -1.15
USP9X-204ENST00000463829 LGR5O75473 907 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 ATP2B4P23634 1241 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 SSFA2P28290 1259 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 PRIMPOLQ96LW4 560 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 ZSCAN10Q96SZ4 725 aaPredicted RBP7.83□□□□□ -1.16
USP9X-204ENST00000463829 SLAIN2Q9P270 581 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 PHF24Q9UPV7 400 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
USP9X-204ENST00000463829 IGFBP4P22692 258 aa7.82□□□□□ -1.16
USP9X-204ENST00000463829 OCLNQ16625 522 aa7.82□□□□□ -1.16
USP9X-204ENST00000463829 GNASQ5JWF2 1037 aa7.82□□□□□ -1.16
USP9X-204ENST00000463829 TMEM214Q6NUQ4 689 aaKnown RBP7.82□□□□□ -1.16
USP9X-204ENST00000463829 SLC9A9Q8IVB4 645 aa7.82□□□□□ -1.16
USP9X-204ENST00000463829 SCG3Q8WXD2 468 aaKnown RBP7.82□□□□□ -1.16
USP9X-204ENST00000463829 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
USP9X-204ENST00000463829 MAP2K3P46734 347 aa7.81□□□□□ -1.16
USP9X-204ENST00000463829 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
USP9X-204ENST00000463829 PGBD3Q8N328 593 aa7.81□□□□□ -1.16
USP9X-204ENST00000463829 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
USP9X-204ENST00000463829 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
USP9X-204ENST00000463829 LRRC4BQ9NT99 713 aa7.81□□□□□ -1.16
USP9X-204ENST00000463829 CXXC1Q9P0U4 656 aaPredicted RBP7.81□□□□□ -1.16
USP9X-204ENST00000463829 IQSEC3Q9UPP2 1182 aaPredicted RBP7.81□□□□□ -1.16
USP9X-204ENST00000463829 CNTNAP5Q8WYK1 1306 aa7.8□□□□□ -1.16
USP9X-204ENST00000463829 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
USP9X-204ENST00000463829 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
USP9X-204ENST00000463829 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
USP9X-204ENST00000463829 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
USP9X-204ENST00000463829 ACDQ96AP0 544 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms