RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 SMARCC1Q92922 1105 aaPredicted RBP5.62□□□□□ -1.51
RGPD6-207ENST00000463822 ANKRD26Q9UPS8 1709 aa5.62□□□□□ -1.51
RGPD6-207ENST00000463822 PIP4K2AP48426 406 aaPredicted RBP5.62□□□□□ -1.51
RGPD6-207ENST00000463822 ACSBG1Q96GR2 724 aa5.62□□□□□ -1.51
RGPD6-207ENST00000463822 EXOC6BQ9Y2D4 811 aa5.62□□□□□ -1.51
RGPD6-207ENST00000463822 PRAMEF22A3QJZ6 481 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 PRIM1P49642 420 aaKnown RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 TAF7LQ5H9L4 462 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 BACH2Q9BYV9 841 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 COL5A2P05997 1499 aaPredicted RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 CEP85Q6P2H3 762 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 DNAJC10Q8IXB1 793 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 GPATCH3Q96I76 525 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 GTF2E1P29083 439 aaPredicted RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 SPATA31A6Q5VVP1 1343 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 AKAP12Q02952 1782 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 MFAP1P55081 439 aaKnown RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 ATP8B2P98198 1209 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 NKX1-1Q15270 411 aaPredicted RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 PROSER3Q2NL68 480 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 CWF19L2Q2TBE0 894 aaKnown RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 CLASRPQ8N2M8 674 aaKnown RBP5.61□□□□□ -1.51
RGPD6-207ENST00000463822 DCTPP1Q9H773 170 aa5.61□□□□□ -1.51
RGPD6-207ENST00000463822 A0A087WZG4 1122 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 IFIT2P09913 472 aaKnown RBP5.6□□□□□ -1.51
RGPD6-207ENST00000463822 BECN1Q14457 450 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 ERC1Q8IUD2 1116 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 MED1Q15648 1581 aaPredicted RBP5.6□□□□□ -1.51
RGPD6-207ENST00000463822 ATP5J2-PTCD1G3V325 749 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 HSP90AB3PQ58FF7 597 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 PPP1R42Q7Z4L9 355 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 TRIM6-TRIM34B2RNG4 842 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 BEND3Q5T5X7 828 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 A1BGP04217 495 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 RTL5Q5HYW3 569 aaPredicted RBP5.6□□□□□ -1.51
RGPD6-207ENST00000463822 UBE3BQ7Z3V4 1068 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 PLBD2Q8NHP8 589 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 PIGBQ92521 554 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 SPATA31A1Q5TZJ5 1347 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 HEG1Q9ULI3 1381 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 GRM8O00222 908 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 NUCB1Q02818 461 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 USP44Q9H0E7 712 aa5.6□□□□□ -1.51
RGPD6-207ENST00000463822 CDC45O75419 566 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 ATP6V1AP38606 617 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 VSIG10Q8N0Z9 540 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 METTL22Q9BUU2 404 aaPredicted RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 ASAP1Q9ULH1 1129 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 NBPF7P0C2Y1 421 aaPredicted RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 HSPA1LP34931 641 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 IL1RAPL2Q9NP60 686 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 TRPC5Q9UL62 973 aaPredicted RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 CWC25Q9NXE8 425 aaPredicted RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 KDM6AO15550 1401 aaPredicted RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 HSP90B1P14625 803 aaKnown RBP5.59□□□□□ -1.51
RGPD6-207ENST00000463822 PEAK1Q9H792 1746 aa5.59□□□□□ -1.51
RGPD6-207ENST00000463822 ERC2O15083 957 aa5.59□□□□□ -1.52
RGPD6-207ENST00000463822 RAB11FIP3O75154 756 aa5.59□□□□□ -1.52
RGPD6-207ENST00000463822 HSP90AA1P07900 732 aaKnown RBP5.59□□□□□ -1.52
RGPD6-207ENST00000463822 KIF1BPQ96EK5 621 aa5.59□□□□□ -1.52
RGPD6-207ENST00000463822 CAMTA1Q9Y6Y1 1673 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 SPATA31A5Q5VU36 1347 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 SPATA31A7Q8IWB4 1347 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 VPS72Q15906 364 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 GORABQ5T7V8 394 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
RGPD6-207ENST00000463822 MX1P20591 662 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 GCKRQ14397 625 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 BARGINQ6ZT62 677 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 RILPL2Q969X0 211 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 ABCC6O95255 1503 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 SIL1Q9H173 461 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 BMP2KLQ5H9B9 411 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 AFF2P51816 1311 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 HMGB2P26583 209 aaKnown RBP5.58□□□□□ -1.52
RGPD6-207ENST00000463822 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
RGPD6-207ENST00000463822 CCDC87Q9NVE4 849 aa5.58□□□□□ -1.52
RGPD6-207ENST00000463822 RHPN1Q8TCX5 695 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 TRMT112Q9UI30 125 aaKnown RBP5.57□□□□□ -1.52
RGPD6-207ENST00000463822 MCCP23508 829 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 GPTP24298 496 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
RGPD6-207ENST00000463822 TBC1D2BQ9UPU7 963 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 ZNF652Q9Y2D9 606 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 REC8O95072 547 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 CCDC57Q2TAC2 916 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 MARCH10Q8NA82 808 aaPredicted RBP5.57□□□□□ -1.52
RGPD6-207ENST00000463822 JARID2Q92833 1246 aaPredicted RBP5.57□□□□□ -1.52
RGPD6-207ENST00000463822 ATG3Q9NT62 314 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 NEURL1BA8MQ27 555 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 LMBR1LQ6UX01 489 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 KIAA1211Q6ZU35 1233 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 CCDC191Q8NCU4 936 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
RGPD6-207ENST00000463822 MAP2P11137 1827 aaKnown RBP5.57□□□□□ -1.52
RGPD6-207ENST00000463822 LOC102724428A0A0B4J2F2 783 aa5.56□□□□□ -1.52
RGPD6-207ENST00000463822 PNMA6EA0A0J9YXQ4 647 aa5.56□□□□□ -1.52
RGPD6-207ENST00000463822 SIK1P57059 783 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms