RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 SYCP1Q15431 976 aa15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 EXOC5O00471 708 aa15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 FBLN1P23142 703 aa15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 TMOD2Q9NZR1 351 aa15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
CHRNA4-202ENST00000463705 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
CHRNA4-202ENST00000463705 MSH6P52701 1360 aa15.77■□□□□ 0.12
CHRNA4-202ENST00000463705 ECHDC1Q9NTX5 307 aa15.77■□□□□ 0.12
CHRNA4-202ENST00000463705 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.12
CHRNA4-202ENST00000463705 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.11
CHRNA4-202ENST00000463705 RNF41Q9H4P4 317 aaPredicted RBP15.77■□□□□ 0.11
CHRNA4-202ENST00000463705 A0A087WZG4 1122 aa15.77■□□□□ 0.11
CHRNA4-202ENST00000463705 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.11
CHRNA4-202ENST00000463705 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.11
CHRNA4-202ENST00000463705 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 TBC1D2Q9BYX2 928 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 SCAND2PQ9GZW5 306 aaPredicted RBP15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 NAPBQ9H115 298 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 PHAXQ9H814 394 aaKnown RBP15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 ABCF2Q9UG63 623 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
CHRNA4-202ENST00000463705 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 CCDC8Q9H0W5 538 aaPredicted RBP15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 SPC24Q8NBT2 197 aa15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
CHRNA4-202ENST00000463705 USP5P45974 858 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 LIMCH1Q9UPQ0 1083 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 ABCC1P33527 1531 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 TBC1D9Q6ZT07 1266 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 TRPM2O94759 1503 aa15.74■□□□□ 0.11
CHRNA4-202ENST00000463705 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 TTC22Q5TAA0 569 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 HMG20BQ9P0W2 317 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 PZPP20742 1482 aa15.73■□□□□ 0.11
CHRNA4-202ENST00000463705 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 ZNF213O14771 459 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 DZIP1Q86YF9 867 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 CDC5LQ99459 802 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 POLR3DP05423 398 aaPredicted RBP15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 FLT4P35916 1363 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 NUCB1Q02818 461 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 PCDHB15Q9Y5E8 787 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 NPATQ14207 1427 aa15.72■□□□□ 0.11
CHRNA4-202ENST00000463705 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 TTLL5Q6EMB2 1281 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 CTCFLQ8NI51 663 aaPredicted RBP15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 CCDC183Q5T5S1 534 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 IQCA1Q86XH1 822 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
CHRNA4-202ENST00000463705 FERMT3Q86UX7 667 aa15.71■□□□□ 0.1
CHRNA4-202ENST00000463705 CARD14Q9BXL6 1004 aa15.71■□□□□ 0.1
CHRNA4-202ENST00000463705 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.1
CHRNA4-202ENST00000463705 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.1
CHRNA4-202ENST00000463705 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 RPGRQ92834 1020 aaKnown RBP15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 C8orf76Q96K31 380 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 CTAGE5O15320 804 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 ZNF76P36508 570 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 PER1O15534 1290 aaPredicted RBP15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 SLC12A7Q9Y666 1083 aa15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
CHRNA4-202ENST00000463705 UQCRFS1P1P0C7P4 283 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 EIF4A2Q14240 407 aaKnown RBP15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 SYCE3A1L190 88 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 ANO10Q9NW15 660 aa15.69■□□□□ 0.1
CHRNA4-202ENST00000463705 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
CHRNA4-202ENST00000463705 ERLIN2O94905 339 aa15.68■□□□□ 0.1
CHRNA4-202ENST00000463705 SSRP1Q08945 709 aaKnown RBP15.68■□□□□ 0.1
CHRNA4-202ENST00000463705 COL17A1Q9UMD9 1497 aaPredicted RBP15.68■□□□□ 0.1
CHRNA4-202ENST00000463705 LDHCP07864 332 aa15.68■□□□□ 0.1
CHRNA4-202ENST00000463705 SSFA2P28290 1259 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms