RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 ADAMTS7Q9UKP4 1686 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 MRC1P22897 1456 aa12.59□□□□□ -0.39
PTPRD-207ENST00000463477 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
PTPRD-207ENST00000463477 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
PTPRD-207ENST00000463477 LINC00116Q8NCU8 138 aa12.59□□□□□ -0.39
PTPRD-207ENST00000463477 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
PTPRD-207ENST00000463477 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
PTPRD-207ENST00000463477 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
PTPRD-207ENST00000463477 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
PTPRD-207ENST00000463477 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
PTPRD-207ENST00000463477 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
PTPRD-207ENST00000463477 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
PTPRD-207ENST00000463477 MCM10Q7L590 875 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 AK7Q96M32 723 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 ZKSCAN2Q63HK3 967 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 ZNF790Q6PG37 636 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
PTPRD-207ENST00000463477 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
PTPRD-207ENST00000463477 SSFA2P28290 1259 aa12.56□□□□□ -0.4
PTPRD-207ENST00000463477 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
PTPRD-207ENST00000463477 RIPK4P57078 832 aa12.56□□□□□ -0.4
PTPRD-207ENST00000463477 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
PTPRD-207ENST00000463477 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
PTPRD-207ENST00000463477 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
PTPRD-207ENST00000463477 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
PTPRD-207ENST00000463477 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 IGHDP01880 384 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 PTGER2P43116 358 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
PTPRD-207ENST00000463477 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
PTPRD-207ENST00000463477 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
PTPRD-207ENST00000463477 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
PTPRD-207ENST00000463477 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 LRP5O75197 1615 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
PTPRD-207ENST00000463477 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 C5P01031 1676 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 GNPATO15228 680 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 RLBP1P12271 317 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 DZIP1LQ8IYY4 767 aaKnown RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
PTPRD-207ENST00000463477 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
PTPRD-207ENST00000463477 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
PTPRD-207ENST00000463477 CRKLP46109 303 aaKnown RBP12.53□□□□□ -0.4
PTPRD-207ENST00000463477 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
PTPRD-207ENST00000463477 SKAP1Q86WV1 359 aa12.53□□□□□ -0.4
PTPRD-207ENST00000463477 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
PTPRD-207ENST00000463477 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.4
PTPRD-207ENST00000463477 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.4
PTPRD-207ENST00000463477 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.4
PTPRD-207ENST00000463477 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.4
PTPRD-207ENST00000463477 KCNQ3O43525 872 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 PHF14O94880 888 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 STARD3NLO95772 234 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
PTPRD-207ENST00000463477 SMIM5Q71RC9 77 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 SMC4Q9NTJ3 1288 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 DDX19BQ9UMR2 479 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
PTPRD-207ENST00000463477 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
PTPRD-207ENST00000463477 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
PTPRD-207ENST00000463477 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
PTPRD-207ENST00000463477 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
PTPRD-207ENST00000463477 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
PTPRD-207ENST00000463477 POLD1P28340 1107 aa12.5□□□□□ -0.41
PTPRD-207ENST00000463477 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
PTPRD-207ENST00000463477 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
PTPRD-207ENST00000463477 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
PTPRD-207ENST00000463477 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
PTPRD-207ENST00000463477 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 TRIM27P14373 513 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 RGS3P49796 1198 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 GNAI1P63096 354 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
PTPRD-207ENST00000463477 ARXQ96QS3 562 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 MIS18AQ9NYP9 233 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 TNNQ9UQP3 1299 aa12.49□□□□□ -0.41
PTPRD-207ENST00000463477 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms