RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
RTCB-202ENST00000463455 U2AF1L5P0DN76 240 aaPredicted RBP15.88■□□□□ 0.13
RTCB-202ENST00000463455 CYP19A1P11511 503 aaPredicted RBP15.88■□□□□ 0.13
RTCB-202ENST00000463455 U2AF1Q01081 240 aaKnown RBP eCLIP15.88■□□□□ 0.13
RTCB-202ENST00000463455 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
RTCB-202ENST00000463455 INTS5Q6P9B9 1019 aaKnown RBP15.88■□□□□ 0.13
RTCB-202ENST00000463455 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
RTCB-202ENST00000463455 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
RTCB-202ENST00000463455 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
RTCB-202ENST00000463455 USP42Q9H9J4 1324 aaKnown RBP15.88■□□□□ 0.13
RTCB-202ENST00000463455 C10orf71Q711Q0 1435 aa15.87■□□□□ 0.13
RTCB-202ENST00000463455 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
RTCB-202ENST00000463455 TGFB2P61812 414 aa15.87■□□□□ 0.13
RTCB-202ENST00000463455 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
RTCB-202ENST00000463455 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
RTCB-202ENST00000463455 SOS1Q07889 1333 aaPredicted RBP15.87■□□□□ 0.13
RTCB-202ENST00000463455 STARD3NLO95772 234 aa15.86■□□□□ 0.13
RTCB-202ENST00000463455 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
RTCB-202ENST00000463455 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
RTCB-202ENST00000463455 PARP3Q9Y6F1 533 aa15.86■□□□□ 0.13
RTCB-202ENST00000463455 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
RTCB-202ENST00000463455 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
RTCB-202ENST00000463455 ZPR1O75312 459 aa15.84■□□□□ 0.13
RTCB-202ENST00000463455 NEFMP07197 916 aa15.84■□□□□ 0.13
RTCB-202ENST00000463455 RALBP1Q15311 655 aa15.84■□□□□ 0.13
RTCB-202ENST00000463455 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
RTCB-202ENST00000463455 COL15A1P39059 1388 aa15.84■□□□□ 0.13
RTCB-202ENST00000463455 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
RTCB-202ENST00000463455 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
RTCB-202ENST00000463455 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
RTCB-202ENST00000463455 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
RTCB-202ENST00000463455 GOLGB1Q14789 3259 aaKnown RBP15.82■□□□□ 0.12
RTCB-202ENST00000463455 A0A087WZG4 1122 aa15.82■□□□□ 0.12
RTCB-202ENST00000463455 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
RTCB-202ENST00000463455 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
RTCB-202ENST00000463455 KIAA1551Q9HCM1 1747 aa15.82■□□□□ 0.12
RTCB-202ENST00000463455 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
RTCB-202ENST00000463455 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
RTCB-202ENST00000463455 TM4SF1P30408 202 aa15.8■□□□□ 0.12
RTCB-202ENST00000463455 EIF5P55010 431 aaKnown RBP15.79■□□□□ 0.12
RTCB-202ENST00000463455 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
RTCB-202ENST00000463455 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
RTCB-202ENST00000463455 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
RTCB-202ENST00000463455 DDR1Q08345 913 aa15.78■□□□□ 0.12
RTCB-202ENST00000463455 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
RTCB-202ENST00000463455 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
RTCB-202ENST00000463455 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.12
RTCB-202ENST00000463455 MCM10Q7L590 875 aa15.77■□□□□ 0.12
RTCB-202ENST00000463455 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
RTCB-202ENST00000463455 ADCY9O60503 1353 aa15.76■□□□□ 0.11
RTCB-202ENST00000463455 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
RTCB-202ENST00000463455 TAF7Q15545 349 aaPredicted RBP15.76■□□□□ 0.11
RTCB-202ENST00000463455 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
RTCB-202ENST00000463455 N4BP2Q86UW6 1770 aaPredicted RBP15.76■□□□□ 0.11
RTCB-202ENST00000463455 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
RTCB-202ENST00000463455 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
RTCB-202ENST00000463455 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
RTCB-202ENST00000463455 NFIXQ14938 502 aa15.75■□□□□ 0.11
RTCB-202ENST00000463455 NFE2L2Q16236 605 aa15.75■□□□□ 0.11
RTCB-202ENST00000463455 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
RTCB-202ENST00000463455 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
RTCB-202ENST00000463455 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
RTCB-202ENST00000463455 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
RTCB-202ENST00000463455 A0A0G2JLW4 131 aa15.74■□□□□ 0.11
RTCB-202ENST00000463455 RGL2O15211 777 aa15.74■□□□□ 0.11
RTCB-202ENST00000463455 DPEP1P16444 411 aa15.74■□□□□ 0.11
RTCB-202ENST00000463455 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
RTCB-202ENST00000463455 KCNQ3O43525 872 aa15.73■□□□□ 0.11
RTCB-202ENST00000463455 KCNA3P22001 575 aa15.73■□□□□ 0.11
RTCB-202ENST00000463455 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
RTCB-202ENST00000463455 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
RTCB-202ENST00000463455 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
RTCB-202ENST00000463455 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
RTCB-202ENST00000463455 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
RTCB-202ENST00000463455 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 SERPINB2P05120 415 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 CLEC4GQ6UXB4 293 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 BCORQ6W2J9 1755 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 KDM3BQ7LBC6 1761 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 CARMIL3Q8ND23 1372 aa15.71■□□□□ 0.11
RTCB-202ENST00000463455 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
RTCB-202ENST00000463455 A1BGP04217 495 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
RTCB-202ENST00000463455 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
RTCB-202ENST00000463455 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
RTCB-202ENST00000463455 CAMTA2O94983 1202 aa15.69■□□□□ 0.1
RTCB-202ENST00000463455 BABAM1Q9NWV8 329 aa15.69■□□□□ 0.1
RTCB-202ENST00000463455 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
RTCB-202ENST00000463455 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
RTCB-202ENST00000463455 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
RTCB-202ENST00000463455 TBC1D2BQ9UPU7 963 aa15.68■□□□□ 0.1
RTCB-202ENST00000463455 ZNF652Q9Y2D9 606 aa15.68■□□□□ 0.1
RTCB-202ENST00000463455 ZNF330Q9Y3S2 320 aaPredicted RBP15.68■□□□□ 0.1
RTCB-202ENST00000463455 C1QTNF8P60827 252 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms