RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 AIMP1Q12904 312 aaKnown RBP15.93■□□□□ 0.14
VAPB-203ENST00000463370 USP35Q9P2H5 1018 aa15.93■□□□□ 0.14
VAPB-203ENST00000463370 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
VAPB-203ENST00000463370 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
VAPB-203ENST00000463370 CACNA1FO60840 1977 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 MYL6BP14649 208 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 IL2RBP14784 551 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 EVA1CP58658 441 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
VAPB-203ENST00000463370 TBC1D9Q6ZT07 1266 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 N4BP2Q86UW6 1770 aaPredicted RBP15.92■□□□□ 0.14
VAPB-203ENST00000463370 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
VAPB-203ENST00000463370 TTC22Q5TAA0 569 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 KSR2Q6VAB6 950 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 DDX54Q8TDD1 881 aaKnown RBP15.92■□□□□ 0.14
VAPB-203ENST00000463370 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 PCDH11XQ9BZA7 1347 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 PCDH11YQ9BZA8 1340 aa15.92■□□□□ 0.14
VAPB-203ENST00000463370 C5P01031 1676 aa15.91■□□□□ 0.14
VAPB-203ENST00000463370 NBR1Q14596 966 aa15.91■□□□□ 0.14
VAPB-203ENST00000463370 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
VAPB-203ENST00000463370 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
VAPB-203ENST00000463370 PPP1R42Q7Z4L9 355 aa15.91■□□□□ 0.14
VAPB-203ENST00000463370 TSHZ3Q63HK5 1081 aa15.9■□□□□ 0.14
VAPB-203ENST00000463370 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
VAPB-203ENST00000463370 IBTKQ9P2D0 1353 aaPredicted RBP15.89■□□□□ 0.14
VAPB-203ENST00000463370 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
VAPB-203ENST00000463370 SSH3Q8TE77 659 aa15.89■□□□□ 0.13
VAPB-203ENST00000463370 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
VAPB-203ENST00000463370 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
VAPB-203ENST00000463370 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
VAPB-203ENST00000463370 POLA2Q14181 598 aa15.88■□□□□ 0.13
VAPB-203ENST00000463370 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
VAPB-203ENST00000463370 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
VAPB-203ENST00000463370 ROBO1Q9Y6N7 1651 aa15.88■□□□□ 0.13
VAPB-203ENST00000463370 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
VAPB-203ENST00000463370 GLI3P10071 1580 aa15.88■□□□□ 0.13
VAPB-203ENST00000463370 SRGAP3O43295 1099 aa15.87■□□□□ 0.13
VAPB-203ENST00000463370 SDSP20132 328 aa15.87■□□□□ 0.13
VAPB-203ENST00000463370 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
VAPB-203ENST00000463370 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
VAPB-203ENST00000463370 NKX1-1Q15270 411 aaPredicted RBP15.87■□□□□ 0.13
VAPB-203ENST00000463370 CDC45O75419 566 aa15.86■□□□□ 0.13
VAPB-203ENST00000463370 PDE1AP54750 535 aa15.86■□□□□ 0.13
VAPB-203ENST00000463370 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
VAPB-203ENST00000463370 ALDH1L1O75891 902 aa15.86■□□□□ 0.13
VAPB-203ENST00000463370 IL1RAPL2Q9NP60 686 aa15.86■□□□□ 0.13
VAPB-203ENST00000463370 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
VAPB-203ENST00000463370 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
VAPB-203ENST00000463370 LINS1Q8NG48 757 aa15.85■□□□□ 0.13
VAPB-203ENST00000463370 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
VAPB-203ENST00000463370 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
VAPB-203ENST00000463370 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
VAPB-203ENST00000463370 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
VAPB-203ENST00000463370 KAZALD1Q96I82 304 aa15.85■□□□□ 0.13
VAPB-203ENST00000463370 OSBPL3Q9H4L5 887 aa15.84■□□□□ 0.13
VAPB-203ENST00000463370 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
VAPB-203ENST00000463370 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
VAPB-203ENST00000463370 RBM25P49756 843 aaKnown RBP15.84■□□□□ 0.13
VAPB-203ENST00000463370 SUCLG2Q96I99 432 aa15.84■□□□□ 0.13
VAPB-203ENST00000463370 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 GRM8O00222 908 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
VAPB-203ENST00000463370 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 ADRA2BP18089 450 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 MYD88Q99836 296 aa15.83■□□□□ 0.12
VAPB-203ENST00000463370 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
VAPB-203ENST00000463370 MX1P20591 662 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 KIF2CQ99661 725 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 NEURL1BA8MQ27 555 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 MTX1Q13505 466 aa15.82■□□□□ 0.12
VAPB-203ENST00000463370 METTL22Q9BUU2 404 aaPredicted RBP15.82■□□□□ 0.12
VAPB-203ENST00000463370 UTYO14607 1347 aa15.81■□□□□ 0.12
VAPB-203ENST00000463370 BECN1Q14457 450 aa15.81■□□□□ 0.12
VAPB-203ENST00000463370 NUTM1Q86Y26 1132 aa15.81■□□□□ 0.12
VAPB-203ENST00000463370 RHPN1Q8TCX5 695 aa15.81■□□□□ 0.12
VAPB-203ENST00000463370 JARID2Q92833 1246 aaPredicted RBP15.81■□□□□ 0.12
VAPB-203ENST00000463370 PA2G4Q9UQ80 394 aaKnown RBP15.81■□□□□ 0.12
VAPB-203ENST00000463370 A1BGP04217 495 aa15.8■□□□□ 0.12
VAPB-203ENST00000463370 BICC1Q9H694 974 aaKnown RBP15.8■□□□□ 0.12
VAPB-203ENST00000463370 COL16A1Q07092 1604 aaPredicted RBP15.8■□□□□ 0.12
VAPB-203ENST00000463370 ADAMTS2O95450 1211 aa15.8■□□□□ 0.12
VAPB-203ENST00000463370 GCKRQ14397 625 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 DISP2A7MBM2 1401 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 EPHA10Q5JZY3 1008 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 STAP2Q9UGK3 403 aa15.79■□□□□ 0.12
VAPB-203ENST00000463370 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 TTLL7Q6ZT98 887 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 PIGBQ92521 554 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 SLKQ9H2G2 1235 aaPredicted RBP15.78■□□□□ 0.12
VAPB-203ENST00000463370 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms