RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 BCL11BQ9C0K0 894 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-208ENST00000463007 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-208ENST00000463007 CRYBG1Q9Y4K1 1723 aa15.16■□□□□ 0.02
HDAC4-208ENST00000463007 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
HDAC4-208ENST00000463007 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
HDAC4-208ENST00000463007 PTMSP20962 102 aa15.16■□□□□ 0.02
HDAC4-208ENST00000463007 G2E3Q7L622 706 aa15.16■□□□□ 0.02
HDAC4-208ENST00000463007 OFD1O75665 1012 aa15.15■□□□□ 0.02
HDAC4-208ENST00000463007 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-208ENST00000463007 C17orf53Q8N3J3 647 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-208ENST00000463007 ABTB2Q8N961 1025 aa15.15■□□□□ 0.02
HDAC4-208ENST00000463007 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
HDAC4-208ENST00000463007 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
HDAC4-208ENST00000463007 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-208ENST00000463007 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
HDAC4-208ENST00000463007 IP6K1Q92551 441 aa15.14■□□□□ 0.01
HDAC4-208ENST00000463007 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
HDAC4-208ENST00000463007 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
HDAC4-208ENST00000463007 TMX3Q96JJ7 454 aa15.13■□□□□ 0.01
HDAC4-208ENST00000463007 PDCL3Q9H2J4 239 aa15.13■□□□□ 0.01
HDAC4-208ENST00000463007 PALD1Q9ULE6 856 aa15.13■□□□□ 0.01
HDAC4-208ENST00000463007 STRCP1A6NGW2 1772 aa15.12■□□□□ 0.01
HDAC4-208ENST00000463007 REC8O95072 547 aa15.12■□□□□ 0.01
HDAC4-208ENST00000463007 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
HDAC4-208ENST00000463007 IL1RAPL2Q9NP60 686 aa15.12■□□□□ 0.01
HDAC4-208ENST00000463007 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
HDAC4-208ENST00000463007 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
HDAC4-208ENST00000463007 ERC2O15083 957 aa15.11■□□□□ 0.01
HDAC4-208ENST00000463007 GADD45BO75293 160 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-208ENST00000463007 DDX54Q8TDD1 881 aaKnown RBP15.11■□□□□ 0.01
HDAC4-208ENST00000463007 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-208ENST00000463007 ZNF445P59923 1031 aa15.1■□□□□ 0.01
HDAC4-208ENST00000463007 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.1■□□□□ 0.01
HDAC4-208ENST00000463007 PXDNQ92626 1479 aa15.1■□□□□ 0.01
HDAC4-208ENST00000463007 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
HDAC4-208ENST00000463007 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
HDAC4-208ENST00000463007 NBPF6Q5VWK0 638 aa15.1■□□□□ 0.01
HDAC4-208ENST00000463007 NBPF4Q96M43 638 aa15.1■□□□□ 0.01
HDAC4-208ENST00000463007 COL18A1P39060 1754 aa15.09■□□□□ 0.01
HDAC4-208ENST00000463007 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
HDAC4-208ENST00000463007 LRSAM1Q6UWE0 723 aa15.08■□□□□ 0.01
HDAC4-208ENST00000463007 USP25Q9UHP3 1055 aa15.08■□□□□ 0.01
HDAC4-208ENST00000463007 NOL7Q9UMY1 257 aaKnown RBP15.08■□□□□ 0.01
HDAC4-208ENST00000463007 TAF7Q15545 349 aaPredicted RBP15.08■□□□□ 0
HDAC4-208ENST00000463007 PDE1AP54750 535 aa15.08■□□□□ 0
HDAC4-208ENST00000463007 FLIIQ13045 1269 aa15.08■□□□□ 0
HDAC4-208ENST00000463007 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
HDAC4-208ENST00000463007 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
HDAC4-208ENST00000463007 ABCC6O95255 1503 aa15.07■□□□□ 0
HDAC4-208ENST00000463007 C1orf167Q5SNV9 1468 aa15.07■□□□□ 0
HDAC4-208ENST00000463007 USHBP1Q8N6Y0 703 aa15.07■□□□□ 0
HDAC4-208ENST00000463007 KCNH5Q8NCM2 988 aa15.07■□□□□ 0
HDAC4-208ENST00000463007 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
HDAC4-208ENST00000463007 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
HDAC4-208ENST00000463007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.06■□□□□ 0
HDAC4-208ENST00000463007 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 CYP2E1P05181 493 aaPredicted RBP15.06■□□□□ 0
HDAC4-208ENST00000463007 CPA1P15085 419 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 FKBP5Q13451 457 aaPredicted RBP15.06■□□□□ 0
HDAC4-208ENST00000463007 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
HDAC4-208ENST00000463007 FIBPO43427 364 aa15.05■□□□□ -0
HDAC4-208ENST00000463007 TSPY26PQ9H489 355 aa15.05■□□□□ -0
HDAC4-208ENST00000463007 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
HDAC4-208ENST00000463007 ORAI2Q96SN7 254 aa15.05■□□□□ -0
HDAC4-208ENST00000463007 ZHX1Q9UKY1 873 aaPredicted RBP15.04■□□□□ -0
HDAC4-208ENST00000463007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.04■□□□□ -0
HDAC4-208ENST00000463007 HMMRO75330 724 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
HDAC4-208ENST00000463007 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 PNMA6EA0A0J9YXQ4 647 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 HOXB7P09629 217 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 USP48Q86UV5 1035 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 SPC24Q8NBT2 197 aa15.04■□□□□ -0
HDAC4-208ENST00000463007 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
HDAC4-208ENST00000463007 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
HDAC4-208ENST00000463007 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
HDAC4-208ENST00000463007 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
HDAC4-208ENST00000463007 GCP02774 474 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 PSME1Q06323 249 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 STK31Q9BXU1 1019 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 IL25Q9H293 177 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 LGR6Q9HBX8 967 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 CNPY2Q9Y2B0 182 aa15.02■□□□□ -0
HDAC4-208ENST00000463007 MCCP23508 829 aa15.02□□□□□ -0.01
HDAC4-208ENST00000463007 DCCP43146 1447 aa15.02□□□□□ -0.01
HDAC4-208ENST00000463007 GNAI2P04899 355 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
HDAC4-208ENST00000463007 C5P01031 1676 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 ESYT1Q9BSJ8 1104 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 MX1P20591 662 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
HDAC4-208ENST00000463007 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 TCHHQ07283 1943 aa15.01□□□□□ -0.01
HDAC4-208ENST00000463007 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms