RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 PRDM10Q9NQV6 1147 aa12.43□□□□□ -0.42
SRRM1-205ENST00000462710 CCDC88AQ3V6T2 1871 aa12.43□□□□□ -0.42
SRRM1-205ENST00000462710 FKBP8Q14318 412 aa12.43□□□□□ -0.42
SRRM1-205ENST00000462710 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
SRRM1-205ENST00000462710 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-205ENST00000462710 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
SRRM1-205ENST00000462710 MTHFSP49914 203 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 COL15A1P39059 1388 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 CYP19A1P11511 503 aaPredicted RBP12.41□□□□□ -0.42
SRRM1-205ENST00000462710 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 ZPR1O75312 459 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
SRRM1-205ENST00000462710 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
SRRM1-205ENST00000462710 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.43
SRRM1-205ENST00000462710 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.43
SRRM1-205ENST00000462710 IL13P35225 146 aa12.39□□□□□ -0.43
SRRM1-205ENST00000462710 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
SRRM1-205ENST00000462710 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
SRRM1-205ENST00000462710 POTECB2RU33 542 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 NFIXQ14938 502 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 STYK1Q6J9G0 422 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
SRRM1-205ENST00000462710 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
SRRM1-205ENST00000462710 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 SERPINB2P05120 415 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 CHRNA5P30532 468 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 PDE6BP35913 854 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 H0YIN7 160 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 NFKBIEO00221 500 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
SRRM1-205ENST00000462710 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
SRRM1-205ENST00000462710 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
SRRM1-205ENST00000462710 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
SRRM1-205ENST00000462710 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
SRRM1-205ENST00000462710 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
SRRM1-205ENST00000462710 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
SRRM1-205ENST00000462710 RASSF7Q02833 373 aa12.35□□□□□ -0.43
SRRM1-205ENST00000462710 DNAJC10Q8IXB1 793 aa12.35□□□□□ -0.43
SRRM1-205ENST00000462710 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
SRRM1-205ENST00000462710 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
SRRM1-205ENST00000462710 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
SRRM1-205ENST00000462710 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
SRRM1-205ENST00000462710 IQCA1LA6NCM1 817 aa12.34□□□□□ -0.43
SRRM1-205ENST00000462710 SLC34A2O95436 690 aa12.34□□□□□ -0.43
SRRM1-205ENST00000462710 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
SRRM1-205ENST00000462710 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-205ENST00000462710 PTCD1O75127 700 aaKnown RBP12.33□□□□□ -0.44
SRRM1-205ENST00000462710 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-205ENST00000462710 STARD3NLO95772 234 aa12.32□□□□□ -0.44
SRRM1-205ENST00000462710 CTCFP49711 727 aaPredicted RBP12.32□□□□□ -0.44
SRRM1-205ENST00000462710 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
SRRM1-205ENST00000462710 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
SRRM1-205ENST00000462710 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
SRRM1-205ENST00000462710 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
SRRM1-205ENST00000462710 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
SRRM1-205ENST00000462710 ZBTB1Q9Y2K1 713 aa12.31□□□□□ -0.44
SRRM1-205ENST00000462710 HTRA3P83110 453 aa12.3□□□□□ -0.44
SRRM1-205ENST00000462710 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
SRRM1-205ENST00000462710 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
SRRM1-205ENST00000462710 SLX4Q8IY92 1834 aa12.3□□□□□ -0.44
SRRM1-205ENST00000462710 PANK3Q9H999 370 aa12.3□□□□□ -0.44
SRRM1-205ENST00000462710 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 MASTLQ96GX5 879 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
SRRM1-205ENST00000462710 RASSF10A6NK89 507 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
SRRM1-205ENST00000462710 RGS19P49795 217 aa12.28□□□□□ -0.44
SRRM1-205ENST00000462710 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
SRRM1-205ENST00000462710 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
SRRM1-205ENST00000462710 SRGNP10124 158 aa12.27□□□□□ -0.44
SRRM1-205ENST00000462710 ERFEQ4G0M1 354 aa12.27□□□□□ -0.44
SRRM1-205ENST00000462710 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.44
SRRM1-205ENST00000462710 TMEM88BA6NKF7 163 aa12.27□□□□□ -0.45
SRRM1-205ENST00000462710 ST5P78524 1137 aa12.27□□□□□ -0.45
SRRM1-205ENST00000462710 FKBP4Q02790 459 aaKnown RBP eCLIP12.27□□□□□ -0.45
SRRM1-205ENST00000462710 TAF1DQ9H5J8 278 aaPredicted RBP12.27□□□□□ -0.45
SRRM1-205ENST00000462710 LGR6Q9HBX8 967 aa12.27□□□□□ -0.45
SRRM1-205ENST00000462710 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.45
SRRM1-205ENST00000462710 CAMTA2O94983 1202 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
SRRM1-205ENST00000462710 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
SRRM1-205ENST00000462710 GAS2L2Q8NHY3 880 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 CACNA1SQ13698 1873 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 NPR1P16066 1061 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms