RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ABCC4O15439 1325 aa25.32■■□□□ 1.64
PTPN18-207ENST00000462321 FLIIQ13045 1269 aa25.32■■□□□ 1.64
PTPN18-207ENST00000462321 G2E3Q7L622 706 aa25.32■■□□□ 1.64
PTPN18-207ENST00000462321 CACNA1FO60840 1977 aa25.31■■□□□ 1.64
PTPN18-207ENST00000462321 MVPQ14764 893 aaKnown RBP25.31■■□□□ 1.64
PTPN18-207ENST00000462321 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
PTPN18-207ENST00000462321 DDX21Q9NR30 783 aaKnown RBP eCLIP25.29■■□□□ 1.64
PTPN18-207ENST00000462321 TMEM57Q8N5G2 664 aa25.29■■□□□ 1.64
PTPN18-207ENST00000462321 ERBB4Q15303 1308 aa25.28■■□□□ 1.64
PTPN18-207ENST00000462321 KCNQ2O43526 872 aa25.28■■□□□ 1.64
PTPN18-207ENST00000462321 HYPKQ9NX55 129 aa25.28■■□□□ 1.64
PTPN18-207ENST00000462321 NHSQ6T4R5 1651 aa25.27■■□□□ 1.64
PTPN18-207ENST00000462321 PDIA6Q15084 440 aa25.27■■□□□ 1.64
PTPN18-207ENST00000462321 TEX13AQ9BXU3 409 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-207ENST00000462321 FKBP5Q13451 457 aaPredicted RBP25.26■■□□□ 1.63
PTPN18-207ENST00000462321 PHAXQ9H814 394 aaKnown RBP25.26■■□□□ 1.63
PTPN18-207ENST00000462321 AAMPQ13685 434 aa25.26■■□□□ 1.63
PTPN18-207ENST00000462321 PROSER3Q2NL68 480 aa25.26■■□□□ 1.63
PTPN18-207ENST00000462321 ITPRIPQ8IWB1 547 aa25.26■■□□□ 1.63
PTPN18-207ENST00000462321 SMARCC1Q92922 1105 aaPredicted RBP25.26■■□□□ 1.63
PTPN18-207ENST00000462321 RBM42Q9BTD8 480 aaKnown RBP25.26■■□□□ 1.63
PTPN18-207ENST00000462321 DDX19BQ9UMR2 479 aa25.26■■□□□ 1.63
PTPN18-207ENST00000462321 ANXA1P04083 346 aa25.25■■□□□ 1.63
PTPN18-207ENST00000462321 RXRBP28702 533 aa25.25■■□□□ 1.63
PTPN18-207ENST00000462321 KRT27Q7Z3Y8 459 aa25.25■■□□□ 1.63
PTPN18-207ENST00000462321 RGS17Q9UGC6 210 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-207ENST00000462321 PALLDQ8WX93 1383 aa25.24■■□□□ 1.63
PTPN18-207ENST00000462321 FAM182BQ5T319 152 aa25.24■■□□□ 1.63
PTPN18-207ENST00000462321 KAT6BQ8WYB5 2073 aa25.23■■□□□ 1.63
PTPN18-207ENST00000462321 INTS3Q68E01 1043 aaKnown RBP25.23■■□□□ 1.63
PTPN18-207ENST00000462321 SLC4A9Q96Q91 983 aa25.23■■□□□ 1.63
PTPN18-207ENST00000462321 PXDNLA1KZ92 1463 aa25.22■■□□□ 1.63
PTPN18-207ENST00000462321 DNAJC10Q8IXB1 793 aa25.22■■□□□ 1.63
PTPN18-207ENST00000462321 LRP10Q7Z4F1 713 aa25.21■■□□□ 1.63
PTPN18-207ENST00000462321 BRWD3Q6RI45 1802 aa25.2■■□□□ 1.63
PTPN18-207ENST00000462321 STARD3NLO95772 234 aa25.2■■□□□ 1.63
PTPN18-207ENST00000462321 FAM196AQ6ZSG2 479 aa25.2■■□□□ 1.63
PTPN18-207ENST00000462321 CICQ96RK0 1608 aaPredicted RBP25.2■■□□□ 1.63
PTPN18-207ENST00000462321 F6X3S4 739 aa25.2■■□□□ 1.62
PTPN18-207ENST00000462321 MYL6BP14649 208 aa25.2■■□□□ 1.62
PTPN18-207ENST00000462321 LOC102724428A0A0B4J2F2 783 aa25.19■■□□□ 1.62
PTPN18-207ENST00000462321 SIK1P57059 783 aa25.19■■□□□ 1.62
PTPN18-207ENST00000462321 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
PTPN18-207ENST00000462321 CHMP4BQ9H444 224 aaKnown RBP25.19■■□□□ 1.62
PTPN18-207ENST00000462321 TJP1Q07157 1748 aa25.19■■□□□ 1.62
PTPN18-207ENST00000462321 CCT4P50991 539 aaKnown RBP25.18■■□□□ 1.62
PTPN18-207ENST00000462321 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
PTPN18-207ENST00000462321 NBPF14Q5TI25 921 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 B4GALNT3Q6L9W6 998 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
PTPN18-207ENST00000462321 POTEAQ6S8J7 498 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 PTF1AQ7RTS3 328 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 SBF2Q86WG5 1849 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 BTAF1O14981 1849 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 A1BGP04217 495 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 ADCY9O60503 1353 aa25.17■■□□□ 1.62
PTPN18-207ENST00000462321 ZNF831Q5JPB2 1677 aa25.16■■□□□ 1.62
PTPN18-207ENST00000462321 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-207ENST00000462321 PIP4K2AP48426 406 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-207ENST00000462321 SLC4A10Q6U841 1118 aa25.16■■□□□ 1.62
PTPN18-207ENST00000462321 XAGE3Q8WTP9 111 aa25.16■■□□□ 1.62
PTPN18-207ENST00000462321 BCL11BQ9C0K0 894 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-207ENST00000462321 PI4KAP2A4QPH2 592 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 KSR2Q6VAB6 950 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 PI4KAP1Q8N8J0 262 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 DNAAF4Q8WXU2 420 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 ZBTB7BO15156 539 aaPredicted RBP25.15■■□□□ 1.62
PTPN18-207ENST00000462321 ATP6V1AP38606 617 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 COPS6Q7L5N1 327 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 ZBTB40Q9NUA8 1239 aa25.15■■□□□ 1.62
PTPN18-207ENST00000462321 N4BP2Q86UW6 1770 aaPredicted RBP25.14■■□□□ 1.61
PTPN18-207ENST00000462321 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.61
PTPN18-207ENST00000462321 ATP10DQ9P241 1426 aa25.14■■□□□ 1.61
PTPN18-207ENST00000462321 MAP3K2Q9Y2U5 619 aa25.12■■□□□ 1.61
PTPN18-207ENST00000462321 ITPK1Q13572 414 aa25.11■■□□□ 1.61
PTPN18-207ENST00000462321 BEND3Q5T5X7 828 aa25.09■■□□□ 1.61
PTPN18-207ENST00000462321 ANKRD13DQ6ZTN6 518 aa25.09■■□□□ 1.61
PTPN18-207ENST00000462321 RIC3Q7Z5B4 369 aa25.09■■□□□ 1.61
PTPN18-207ENST00000462321 SRCIN1Q9C0H9 1055 aa25.09■■□□□ 1.61
PTPN18-207ENST00000462321 PLBD2Q8NHP8 589 aa25.08■■□□□ 1.61
PTPN18-207ENST00000462321 ZBTB1Q9Y2K1 713 aa25.08■■□□□ 1.61
PTPN18-207ENST00000462321 RREB1Q92766 1687 aa25.08■■□□□ 1.6
PTPN18-207ENST00000462321 PCDHB15Q9Y5E8 787 aa25.07■■□□□ 1.6
PTPN18-207ENST00000462321 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-207ENST00000462321 CRKLP46109 303 aaKnown RBP25.06■■□□□ 1.6
PTPN18-207ENST00000462321 CCDC87Q9NVE4 849 aa25.06■■□□□ 1.6
PTPN18-207ENST00000462321 LY75O60449 1722 aa25.06■■□□□ 1.6
PTPN18-207ENST00000462321 COL5A3P25940 1745 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-207ENST00000462321 TRIM37O94972 964 aa25.06■■□□□ 1.6
PTPN18-207ENST00000462321 IBTKQ9P2D0 1353 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-207ENST00000462321 ALDH1L1O75891 902 aa25.05■■□□□ 1.6
PTPN18-207ENST00000462321 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
PTPN18-207ENST00000462321 TTLL7Q6ZT98 887 aa25.05■■□□□ 1.6
PTPN18-207ENST00000462321 MEIS3Q99687 375 aa25.05■■□□□ 1.6
PTPN18-207ENST00000462321 METTL22Q9BUU2 404 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-207ENST00000462321 LINS1Q8NG48 757 aa25.04■■□□□ 1.6
PTPN18-207ENST00000462321 NEXNQ0ZGT2 675 aa25.03■■□□□ 1.6
PTPN18-207ENST00000462321 LINC00116Q8NCU8 138 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms