RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
RTF1-202ENST00000462276 EP400Q96L91 3159 aa13.62□□□□□ -0.23
RTF1-202ENST00000462276 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
RTF1-202ENST00000462276 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
RTF1-202ENST00000462276 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
RTF1-202ENST00000462276 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
RTF1-202ENST00000462276 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
RTF1-202ENST00000462276 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
RTF1-202ENST00000462276 KDM3BQ7LBC6 1761 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
RTF1-202ENST00000462276 APBA3O96018 575 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 NEFLP07196 543 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
RTF1-202ENST00000462276 PDIA6Q15084 440 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 NPM2Q86SE8 214 aaKnown RBP13.6□□□□□ -0.23
RTF1-202ENST00000462276 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
RTF1-202ENST00000462276 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
RTF1-202ENST00000462276 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
RTF1-202ENST00000462276 IL6STP40189 918 aaPredicted RBP13.59□□□□□ -0.23
RTF1-202ENST00000462276 FLIIQ13045 1269 aa13.59□□□□□ -0.23
RTF1-202ENST00000462276 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
RTF1-202ENST00000462276 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
RTF1-202ENST00000462276 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
RTF1-202ENST00000462276 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
RTF1-202ENST00000462276 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
RTF1-202ENST00000462276 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
RTF1-202ENST00000462276 NHSQ6T4R5 1651 aa13.58□□□□□ -0.24
RTF1-202ENST00000462276 DOT1LQ8TEK3 1739 aa13.58□□□□□ -0.24
RTF1-202ENST00000462276 PAPPAQ13219 1627 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
RTF1-202ENST00000462276 RGL2O15211 777 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 A1BGP04217 495 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
RTF1-202ENST00000462276 ITPK1Q13572 414 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 AAMPQ13685 434 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 LRP10Q7Z4F1 713 aa13.57□□□□□ -0.24
RTF1-202ENST00000462276 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
RTF1-202ENST00000462276 DZIP1LQ8IYY4 767 aaKnown RBP13.57□□□□□ -0.24
RTF1-202ENST00000462276 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 A0A087WZG4 1122 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 TRIM27P14373 513 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
RTF1-202ENST00000462276 BAG6P46379 1132 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 NBPF14Q5TI25 921 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
RTF1-202ENST00000462276 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
RTF1-202ENST00000462276 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
RTF1-202ENST00000462276 ITGB4P16144 1822 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 MYL6BP14649 208 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
RTF1-202ENST00000462276 PROSER3Q2NL68 480 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 COPS6Q7L5N1 327 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 UBR2Q8IWV8 1755 aa13.55□□□□□ -0.24
RTF1-202ENST00000462276 PLIN1O60240 522 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 RPS6KA4O75676 772 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
RTF1-202ENST00000462276 G2E3Q7L622 706 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
RTF1-202ENST00000462276 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
RTF1-202ENST00000462276 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
RTF1-202ENST00000462276 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 PROM2Q8N271 834 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 DNAAF4Q8WXU2 420 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
RTF1-202ENST00000462276 ABCC4O15439 1325 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 IBTKQ9P2D0 1353 aaPredicted RBP13.53□□□□□ -0.24
RTF1-202ENST00000462276 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
RTF1-202ENST00000462276 ANXA1P04083 346 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 AK7Q96M32 723 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 LRRC4BQ9NT99 713 aa13.52□□□□□ -0.25
RTF1-202ENST00000462276 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
RTF1-202ENST00000462276 AIMP1Q12904 312 aaKnown RBP13.51□□□□□ -0.25
RTF1-202ENST00000462276 DDX19BQ9UMR2 479 aa13.51□□□□□ -0.25
RTF1-202ENST00000462276 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
RTF1-202ENST00000462276 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
RTF1-202ENST00000462276 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 GNPATO15228 680 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 TRIM28Q13263 835 aaKnown RBP13.5□□□□□ -0.25
RTF1-202ENST00000462276 MVPQ14764 893 aaKnown RBP13.5□□□□□ -0.25
RTF1-202ENST00000462276 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 LINS1Q8NG48 757 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms