RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
HPS3-204ENST00000462030 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.15
HPS3-204ENST00000462030 TMEM87AQ8NBN3 555 aa22.26■■□□□ 1.15
HPS3-204ENST00000462030 ARID3AQ99856 593 aa22.26■■□□□ 1.15
HPS3-204ENST00000462030 SOS1Q07889 1333 aaPredicted RBP22.26■■□□□ 1.15
HPS3-204ENST00000462030 FLT4P35916 1363 aa22.26■■□□□ 1.15
HPS3-204ENST00000462030 TSPOAP1O95153 1857 aa22.25■■□□□ 1.15
HPS3-204ENST00000462030 UBTFL1P0CB47 393 aaPredicted RBP22.25■■□□□ 1.15
HPS3-204ENST00000462030 CCDC183Q5T5S1 534 aa22.25■■□□□ 1.15
HPS3-204ENST00000462030 SNX14Q9Y5W7 946 aa22.25■■□□□ 1.15
HPS3-204ENST00000462030 RAD50Q92878 1312 aa22.25■■□□□ 1.15
HPS3-204ENST00000462030 FAM184AQ8NB25 1140 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 SBNO1A3KN83 1393 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 HCLS1P14317 486 aaPredicted RBP22.24■■□□□ 1.15
HPS3-204ENST00000462030 UVSSAQ2YD98 709 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 PI4K2BQ8TCG2 481 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 SSH3Q8TE77 659 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 TTC14Q96N46 770 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
HPS3-204ENST00000462030 SGSM2O43147 1006 aa22.23■■□□□ 1.15
HPS3-204ENST00000462030 AK2P54819 239 aa22.23■■□□□ 1.15
HPS3-204ENST00000462030 EPB41L2O43491 1005 aaKnown RBP22.23■■□□□ 1.15
HPS3-204ENST00000462030 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
HPS3-204ENST00000462030 RASEFQ8IZ41 740 aa22.23■■□□□ 1.15
HPS3-204ENST00000462030 DNTTIP2Q5QJE6 756 aaKnown RBP22.22■■□□□ 1.15
HPS3-204ENST00000462030 SURF6O75683 361 aaKnown RBP22.22■■□□□ 1.15
HPS3-204ENST00000462030 ADCY5O95622 1261 aa22.22■■□□□ 1.15
HPS3-204ENST00000462030 JARID2Q92833 1246 aaPredicted RBP22.22■■□□□ 1.15
HPS3-204ENST00000462030 TTC12Q9H892 705 aaPredicted RBP22.22■■□□□ 1.15
HPS3-204ENST00000462030 SYT1P21579 422 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 AMPHP49418 695 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 RUFY3Q7L099 469 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 PPP1R42Q7Z4L9 355 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 LSG1Q9H089 658 aaKnown RBP22.21■■□□□ 1.15
HPS3-204ENST00000462030 PXDNLA1KZ92 1463 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 DTNBO60941 627 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 C17orf53Q8N3J3 647 aaPredicted RBP22.21■■□□□ 1.15
HPS3-204ENST00000462030 PIBF1Q8WXW3 757 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
HPS3-204ENST00000462030 ADAMTS13Q76LX8 1427 aa22.21■■□□□ 1.15
HPS3-204ENST00000462030 GNAT3A8MTJ3 354 aa22.2■■□□□ 1.14
HPS3-204ENST00000462030 STX6O43752 255 aa22.2■■□□□ 1.14
HPS3-204ENST00000462030 RHPN1Q8TCX5 695 aa22.2■■□□□ 1.14
HPS3-204ENST00000462030 FIBPO43427 364 aa22.2■■□□□ 1.14
HPS3-204ENST00000462030 CPA1P15085 419 aa22.2■■□□□ 1.14
HPS3-204ENST00000462030 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
HPS3-204ENST00000462030 UBE2HP62256 183 aa22.19■■□□□ 1.14
HPS3-204ENST00000462030 MYRIPQ8NFW9 859 aa22.19■■□□□ 1.14
HPS3-204ENST00000462030 LARGE1O95461 756 aa22.19■■□□□ 1.14
HPS3-204ENST00000462030 F13A1P00488 732 aa22.19■■□□□ 1.14
HPS3-204ENST00000462030 IL17REQ8NFR9 667 aa22.19■■□□□ 1.14
HPS3-204ENST00000462030 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
HPS3-204ENST00000462030 RAB11FIP3O75154 756 aa22.18■■□□□ 1.14
HPS3-204ENST00000462030 POLA2Q14181 598 aa22.18■■□□□ 1.14
HPS3-204ENST00000462030 NOLC1Q14978 699 aaKnown RBP eCLIP22.18■■□□□ 1.14
HPS3-204ENST00000462030 MTERF4Q7Z6M4 381 aaKnown RBP22.18■■□□□ 1.14
HPS3-204ENST00000462030 LIMCH1Q9UPQ0 1083 aa22.18■■□□□ 1.14
HPS3-204ENST00000462030 SPG7Q9UQ90 795 aa22.18■■□□□ 1.14
HPS3-204ENST00000462030 CWC27Q6UX04 472 aaKnown RBP22.17■■□□□ 1.14
HPS3-204ENST00000462030 TSC1Q92574 1164 aa22.17■■□□□ 1.14
HPS3-204ENST00000462030 SMC3Q9UQE7 1217 aa22.17■■□□□ 1.14
HPS3-204ENST00000462030 TMEM2Q9UHN6 1383 aa22.17■■□□□ 1.14
HPS3-204ENST00000462030 TTC21AQ8NDW8 1320 aa22.17■■□□□ 1.14
HPS3-204ENST00000462030 SRGAP3O43295 1099 aa22.16■■□□□ 1.14
HPS3-204ENST00000462030 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
HPS3-204ENST00000462030 CNTROBQ8N137 903 aa22.16■■□□□ 1.14
HPS3-204ENST00000462030 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.16■■□□□ 1.14
HPS3-204ENST00000462030 GIMAP6Q6P9H5 292 aa22.16■■□□□ 1.14
HPS3-204ENST00000462030 LETM1O95202 739 aaPredicted RBP22.15■■□□□ 1.14
HPS3-204ENST00000462030 FUCA2Q9BTY2 467 aa22.15■■□□□ 1.14
HPS3-204ENST00000462030 NBPF7P0C2Y1 421 aaPredicted RBP22.15■■□□□ 1.14
HPS3-204ENST00000462030 CASTP20810 708 aaKnown RBP22.15■■□□□ 1.14
HPS3-204ENST00000462030 KIF1BPQ96EK5 621 aa22.15■■□□□ 1.14
HPS3-204ENST00000462030 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
HPS3-204ENST00000462030 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
HPS3-204ENST00000462030 KDM4AO75164 1064 aa22.14■■□□□ 1.13
HPS3-204ENST00000462030 TAF7Q15545 349 aaPredicted RBP22.14■■□□□ 1.13
HPS3-204ENST00000462030 CCDC83Q8IWF9 413 aa22.14■■□□□ 1.13
HPS3-204ENST00000462030 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
HPS3-204ENST00000462030 CRYBG1Q9Y4K1 1723 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 DIP2BQ9P265 1576 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 AP5Z1O43299 807 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 PLCB2Q00722 1185 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 DNM1Q05193 864 aaKnown RBP22.13■■□□□ 1.13
HPS3-204ENST00000462030 ESF1Q9H501 851 aaKnown RBP22.13■■□□□ 1.13
HPS3-204ENST00000462030 RGPD8O14715 1765 aaPredicted RBP22.13■■□□□ 1.13
HPS3-204ENST00000462030 PRIMPOLQ96LW4 560 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
HPS3-204ENST00000462030 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
HPS3-204ENST00000462030 TNRQ92752 1358 aa22.12■■□□□ 1.13
HPS3-204ENST00000462030 GJB2P29033 226 aa22.12■■□□□ 1.13
HPS3-204ENST00000462030 MTMR6Q9Y217 621 aa22.12■■□□□ 1.13
HPS3-204ENST00000462030 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
HPS3-204ENST00000462030 PTH1RQ03431 593 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 ADCK5Q3MIX3 580 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 ZNF710Q8N1W2 664 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 NGDNQ8NEJ9 315 aaKnown RBP22.11■■□□□ 1.13
HPS3-204ENST00000462030 ATP6V1DQ9Y5K8 247 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 EIF2S2P20042 333 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms